Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1485 ATGAAGGGTCTCTTCAAGTCTAAACCTCGCACTCCTGCAGATGTAGTGCGTCACACCAGAGATCTTCTACTCGTTGTTGATCGGAACTCTGAAACCCGAGAAAGCAAGAGAGAAGAGAAGCAAATGTCCGAGCTGTTTAAAAACATCAGGGAACTCAAACAAATCCTGTATGGAAACAGTGATTCTGAACCAGTTGCGGAAGCTTGTGCACAGTTGACTCAGGAGTTCTTTAAGGAGGATACTTTGCGTCTGTTTATCAAATGTCTTCCAAAATTGAATTTGGAGGCCAGAAAAGATGCCACTCAAGTTGTTGCAAATTTACAAAGGCAACAGGTTCAGTTTAAGTTGATTGCATCTGATTACCTGGAGAAAAATCTGGATCTCATGGATGTCTTGATAGTCGGCTATGAAAACACAGATATGGCTTTACACTATGGTGCAATGCTGAGGGAGTGCATACGACATCAGATTGTTGCAAAATATGTTCTCAACTCACCTCGTATGAAGAAATTCTTTGACTATATCCAACTCCCAAATTTTGACATTGCTGCGGATGCTGCAGCTACCTTTAAGGAGCTCTTGACAAGACATAAATCTACTGTAGCCGAATTCCTCTCCAAGAATTATGAATGGTTTTTTGCGGAATATAACACTAAGCTGTTGGAATCTTCCAACTATATTACAAGGCGCCAAGCTGTCAAGTTGTTGGGAGATATATTACTTGATCGTACAAATTCAGCAGTAATGACACGATATGTGAGCTCAAGAGACAACTTGAGGATTTTAATGAATCTTCTTAGAGAGTCAAGCAAGAGCATACAGATTGAAGCATTTCATGTTTTCAAGTTATTTGCTGCTAACCAACATAAACCAGCTGATATAATAAGTATATTTGTCGCAAACAAAAGTAAGATGCTGAGACTATTGGAAGACTTCAAAATTGATAAAGAGGATGAACAATTTGAAGCTGACAAAGCTCAAGTGATGAAGGAAATCGAAGCTCTTTAA 1008 0.3919 MKGLFKSKPRTPADVVRHTRDLLLVVDRNSETRESKREEKQMSELFKNIRELKQILYGNSDSEPVAEACAQLTQEFFKEDTLRLFIKCLPKLNLEARKDATQVVANLQRQQVQFKLIASDYLEKNLDLMDVLIVGYENTDMALHYGAMLRECIRHQIVAKYVLNSPRMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYEWFFAEYNTKLLESSNYITRRQAVKLLGDILLDRTNSAVMTRYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQHKPADIISIFVANKSKMLRLLEDFKIDKEDEQFEADKAQVMKEIEAL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1485 335 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 1 335 IPR013878 -
Pvu6g1485 335 Gene3D - 3 335 IPR011989 -
Pvu6g1485 335 SUPERFAMILY ARM repeat 10 335 IPR016024 -
Pvu6g1485 335 PANTHER OS07G0585100 PROTEIN 1 335 - -
Pvu6g1485 335 Coils Coil 35 55 - -
Pvu6g1485 335 Pfam Mo25-like 4 335 IPR013878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1485 Pvu-Chr6 25653392 25657963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1485 K08272 - gmx:100817060 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1485 6 25653392 25657963 Pvu6g1485 6 25653392 25657963 ECH
Pvu3g0877 3 14205146 14209390 Pvu6g1485 6 25653392 25657963 PCT