Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1266 ATGGTGAAGGTGCGCATGAACACCGCCGATGTCGCCGCCGAGGTTAAATGCCTCCGACGCCTCATCGGAATGCGGTGCTCCAACGTCTACGATCTCTCTCCCAAGACCTACGTGTTCAAGCTGATGAACAGCAGTGGAGTTTCGGAATCCGGGGAGAGCGAGAAGGTTCTCCTGCTCATGGAGAGTGGCGTGAGATTGCACTCTACTATTTACATGCGTGACAAGAGCAACACGCCTTCTGGCTTCACTCTCAAATTGAGGAAGCATATTCGGACGAGGAGGCTCGAGGATGTGCGCCAACTTGGGTACGATCGGATTATCCTCTTCCAATTTGGAGTTGGGGAGAATGCAAACTATGTTATACTGGAGCTGTATGCCCAGGGGAATATCCTCCTCACAGATTCTAATTTTACCGTCATGACTCTGCTGCGGTCTCACAGGGATGATGATAAAGGGCTCGCAATTATGTCACGTCATCGATATCCTGTTGAAAGTTGTAGAGTTTTTGAGCGAACTACTATTGAAAAGTTGCAGGCATCTCTGGTGTCTTCCAAGGAAGATGATAATGATGAGACTGTTAAGGTCAATGGAAATGGAAGTAATGCTTCTAATGTAGGAAAAGAGAAGCAAGGAACCCAAAAAGGTGGGAAGTCATCAACACTGAAAGTTGTCCTTGGGGAGGCACTTGGTTATGGACCTGCACTTTCTGAACATATAATAATAGATGCTGGCCTAATCCCTAGTACTAAAGTTCCCAAAGATAAAACGTGGGATAATGCTACTATTCAAGCTTTGGTTCAAGCTGTTGTGAAGTTTGAAGATTGGATGCAGGATATTATTTCTGGTGAAGTAGTCCCTGAAGGATACATTTTGATGCAGAACAGAAGTTTGGGGAACAATTCTTCAATATCTCAGCCTGGAAATGTTAGCCAGATGTATGATGAGTTCTGCCCCATCTTACTCAACCAATTTAAGTCAAGGGATTATACAAAATTTGAGACATTTGATGCAGCCTTGGATGAGTTCTACAGCAAAATTGAGAGTCAAAGGTCTGAACAGCAGCAGAAAGCCAAAGAAAACACAGCTGCTCAGAAACTTAATAAGATTCGCCAGGATCAGGAAAATCGAGTACATGCTTTGAGGAAAGAAGCTGATCAATGTGTTAAGATGGCAGAATTGATAGAATACAACTTGGAAGATGTGGATGCTGCTATAGTAGCTGTTCGTGTAGCTCTAGCTAAAGGTATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCAGTAGCTGGCCTCATCGACAAGCTCCATCTGGAAAGGAACTGCATGACTTTATTGTTAAGCAACAATCTTGATGAGATGGACGATGATGAGAAGACACTCCCTGTGGATAAGGTCGAAGTTGATTTAGCTCTTTCAGCTCATGCCAATGCTCGGAGGTGGTATGAACAGAAGAAAAAGCAGGAGAGCAAACAGGAAAAAACTGTAACTGCCCATGAAAAGGCTTTTAAAGCTGCAGAAAGAAAGACTCGCCAACAGCTTAGTCAGGAAAAAGCTGTTGCCTCAATTTCACATATACGTAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTACCAGTGAGAACTATTTGGTTATCAGTGGACGTGATGCACAGCAAAATGAGCTGATAGTGAAGCGGTATATGTCAAAAGGAGACCTATATGTACATGCTGATCTGCATGGAGCTTCTAGTACTGTTATCAAGAATCACAAGCCTGTGCAGCCAGTTCCACCACTGACCCTAAACCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCAAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAGGTTAGTAAAACAGCTCCTACAGGTGAGTATCTGACAGTAGGGAGTTTCATGATCCGGGGAAAGAAAAATTTTCTTCCCCCACACCCTCTTATCATGGGTTTTGGCCTTCTGTTTCGCTTGGATGAGAGTTCCTTAGGATCACATTTAAATGAACGAAGAGTAAGAGGAGAGGAAGAAGCAACAGATGATTTTGAAGAAAATGCTCCTCTTGAAGACAGATCTGATTCAGAGTCTGAAAAGGATGTCACTGATATAAAATCTGTCGCTGACTCAGAAATGAATGGTAAATTATCAGCAGATTCACACAAGCCCCTGTCAGAAGATTTTCCCGAAGATGCATCACAAACAGGTTTGGCTTCTATCAGCGCCAAAAAGGAAATTTCACATGCTTTTCCTGTGAAAGAAACAAGTATATCAAATATGGTTGATAGGGAGATATTTTCCGACATTGGCAGAGACAGCTTAGTGGCTGTGACCCCTCAACTTGAGGAACTTATTGACCAAGCTCTGGAACTTGGATCTGTTGCTAAATCAAGTAAGATTTATGGAACTGAGAACTCCTCTCAAATTGATCTAGGCGGTGACAAACATTCTGAACAAAGCAAAGCGGCAGTTAGGGATAAACCTTATATATCAAAAGCTGAGAGACGAAAGCTTAAAAGGGAACAGAAACACGAAGATGCAGATTCAAATGTTGAACATGGAAAGGATGAACTGAAACTGAAAGATATTTCTGAAAATCTACCAGAAAAAGAAGATCAAAATGTAAAAAAAGGTGGTGGTCAAAAAATCAGCCGAGGGCAGAAGGGTAAACTTAAAAAGATAAAGGAGAAGTATGCTGGCCAGGACGAGGGAGAAAGGAACATTCGAATGGCATTGTTGGCTTCTTCTGGAAAATCAATCAAGAAGGAAGAGACGTCATCTGAAAATGATGCATTGGACACGGGGGAAATATCTGGCAATGCAGGTCCTGTTGAAGCACCAAAAATATGTTATAAGTGTAAGAAGGCAGGTCACTTGTCTCAGGATTGTAAGGAGAAATCAGATGATCTGGCGCATAGGCATGCAATTGGTGAAGCTGAAGAAAATTCAAAAATGACTGATCTTGACACTTCCCAAGCAGACAGGGTGACAATGGAAGAAGATGATATTCATGAAATAGGAGAAGAAGAAAAAGAAAAACTAAATGACGTGGATTACTTGACTGGGAATCCACTTCCTAATGACATTCTCTTGTATGCTATTCCTGTCTGTAGTCCTTACAATGCACTTCAGTCTTACAAATATCGGGTGAAGATAATTCCTGGACCAGCGAAGAAAGGGAAAGCTGCGAAAACTGCAATGAACTTGTTCAGCCACATGTCAGAAGCAACAACCCGGGAGAAGGAGTTGATGAAGGCCTGTACAGATCCTGAGCTAGTTGCTGCAATTATTGGTAATGTGAAAATATCAGCAGCCGGCCTTACTCAATTGAAGCAAAAGCAAAAGAAAGGCAAGAAGAGCAGCAAACAAGCTAGTTAG 3414 0.4256 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHSTIYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGVGENANYVILELYAQGNILLTDSNFTVMTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTIEKLQASLVSSKEDDNDETVKVNGNGSNASNVGKEKQGTQKGGKSSTLKVVLGEALGYGPALSEHIIIDAGLIPSTKVPKDKTWDNATIQALVQAVVKFEDWMQDIISGEVVPEGYILMQNRSLGNNSSISQPGNVSQMYDEFCPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENTAAQKLNKIRQDQENRVHALRKEADQCVKMAELIEYNLEDVDAAIVAVRVALAKGMNWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTLLLSNNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYEQKKKQESKQEKTVTAHEKAFKAAERKTRQQLSQEKAVASISHIRKVHWFEKFNWFITSENYLVISGRDAQQNELIVKRYMSKGDLYVHADLHGASSTVIKNHKPVQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEATDDFEENAPLEDRSDSESEKDVTDIKSVADSEMNGKLSADSHKPLSEDFPEDASQTGLASISAKKEISHAFPVKETSISNMVDREIFSDIGRDSLVAVTPQLEELIDQALELGSVAKSSKIYGTENSSQIDLGGDKHSEQSKAAVRDKPYISKAERRKLKREQKHEDADSNVEHGKDELKLKDISENLPEKEDQNVKKGGGQKISRGQKGKLKKIKEKYAGQDEGERNIRMALLASSGKSIKKEETSSENDALDTGEISGNAGPVEAPKICYKCKKAGHLSQDCKEKSDDLAHRHAIGEAEENSKMTDLDTSQADRVTMEEDDIHEIGEEEKEKLNDVDYLTGNPLPNDILLYAIPVCSPYNALQSYKYRVKIIPGPAKKGKAAKTAMNLFSHMSEATTREKELMKACTDPELVAAIIGNVKISAAGLTQLKQKQKKGKKSSKQAS* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1266 1137 MobiDBLite consensus disorder prediction 680 748 - -
Pvu6g1266 1137 MobiDBLite consensus disorder prediction 816 906 - -
Pvu6g1266 1137 Pfam NFACT protein RNA binding domain 540 651 IPR008532 -
Pvu6g1266 1137 Coils Coil 363 383 - -
Pvu6g1266 1137 MobiDBLite consensus disorder prediction 826 890 - -
Pvu6g1266 1137 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 3 1125 - -
Pvu6g1266 1137 SUPERFAMILY Retrovirus zinc finger-like domains 958 983 IPR036875 GO:0003676|GO:0008270
Pvu6g1266 1137 MobiDBLite consensus disorder prediction 194 217 - -
Pvu6g1266 1137 Pfam NFACT protein C-terminal domain 1022 1115 IPR021846 -
Pvu6g1266 1137 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Pvu6g1266 1137 PANTHER - 3 1125 - -
Pvu6g1266 1137 MobiDBLite consensus disorder prediction 188 217 - -
Pvu6g1266 1137 MobiDBLite consensus disorder prediction 931 952 - -
Pvu6g1266 1137 Pfam NFACT N-terminal and middle domains 217 533 - -
Pvu6g1266 1137 Pfam NFACT N-terminal and middle domains 10 180 - -
Pvu6g1266 1137 Gene3D - 957 1011 - -
Pvu6g1266 1137 ProSiteProfiles Zinc finger CCHC-type profile. 962 977 IPR001878 GO:0003676|GO:0008270
Pvu6g1266 1137 SMART c2hcfinal6 961 977 IPR001878 GO:0003676|GO:0008270
Pvu6g1266 1137 Pfam Zinc knuckle 961 977 IPR001878 GO:0003676|GO:0008270
Pvu6g1266 1137 MobiDBLite consensus disorder prediction 702 718 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1266 K24971 - gmx:100807437 1901.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1266 6 23671903 23682585 Pvu6g1266 6 23671903 23682585 ECH