Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1259 ATGGATATGCGAGGAGATGGGATTTTCCCGGATGAGGTGGTTATTCAAATTCTCGCAAGGCTGCCTGTGAAGTCGCTTTTCAGGTTCAAGACCGTGTGCAAACTGTGGAATAGGTTGTCTTTGGATAAGTATTTTGTTCAACTCTACAATGAGGTGTCTAGGAAGAACCCCATGATTCTGGTCGAGGTTTCTGATTCGTATGGGTCCAAATCTAGCTTAATATGTGTTGATAATTTGAGGGGTGTGTCTGAGTTTTCACTGAGTTTCTTGAATGATAGAGTTAAGGTTCGAGCATCTTGTAATGGCCTGCTTTGCTGCTCTAGTATTCCTGATAAGGGCGTCTTCTATGTCTGTAATCCGGTCACTCGCGAGTACCGGTTGCTTCCCAAGAGTAGGGAAAGGCCTGTGACTCGGTTTTATCCGGATGGCGAGGCTACCTTGGTTGGCCTGGCCTGTGATTCTTCTTATCAGAAGTTCAATGTTGTTCTAGCAGGCTACCATCGCACTTTTGGTCATAGGCCGGATGGGAGTTTCATATGTTTGGTGTTTGATTCCGAGTTGAACAAGTGGAGGAAGTTTGTCTCATTACAAGATGACCATTTCACTCACATGAATAAGAACCAGGTTGTTTTCTCTACTTATATACTTGTGCTTGATTTAAGCTGTGACGTTTGGAGGAAGATGCAGCTACCATATGACTTGATTTATGGAAATGGTTATAGGATTTATCTCTTAGACTTTGATGGCTGCTTGTCTGTTATTAAAATCTCAGAAGCATGGATGAACATATGGGTGCTAAAAGATTACTGGAAAGATGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTGCCAGGCATTTTCCCGATCAGTCAGACTGGTGAATATGTTTTTTTGGCAACTCATAAGCAGATTTTGGTGTATCATTGCAAGAGTCAAGTTTGGAAAGAAATGTACTCTGTGAAGTATAGCTCAACACTCCCATTATGGTTTTCTGCTCATGCATATCGCAGCACAATGTTCTCATGTAACTGA 1050 0.4238 MDMRGDGIFPDEVVIQILARLPVKSLFRFKTVCKLWNRLSLDKYFVQLYNEVSRKNPMILVEVSDSYGSKSSLICVDNLRGVSEFSLSFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREYRLLPKSRERPVTRFYPDGEATLVGLACDSSYQKFNVVLAGYHRTFGHRPDGSFICLVFDSELNKWRKFVSLQDDHFTHMNKNQVVFSTYILVLDLSCDVWRKMQLPYDLIYGNGYRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGEYVFLATHKQILVYHCKSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1259 349 TIGRFAM F_box_assoc_1: F-box protein interaction domain 99 317 IPR017451 -
Pvu6g1259 349 Gene3D - 9 45 - -
Pvu6g1259 349 SUPERFAMILY F-box domain 9 78 IPR036047 GO:0005515
Pvu6g1259 349 Pfam F-box-like 10 43 IPR001810 GO:0005515
Pvu6g1259 349 ProSiteProfiles F-box domain profile. 9 52 IPR001810 GO:0005515
Pvu6g1259 349 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 347 - -
Pvu6g1259 349 SMART fbox_2 9 49 IPR001810 GO:0005515
Pvu6g1259 349 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1259 Pvu-Chr6 23548340 23549421 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1259 - - gmx:100811223 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1259 6 23548340 23549421 Pvu6g1259 6 23548340 23549421 ECH