Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1258 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGAGTGGACCGTCATGGGTTGAATCACAAAAAGGGGGTTTCTGGTGGTGTGCTTCCGGGAATGAAAGGTCATGGTAAAGAAGGGCCGGTGAAGGTTTTCCCGAGAGAGGAACTCGCTGAGGGTGATAGCGGTGCTGCGCGGACTGCATGTGATGCTACTTCATCAGGTGATGACTTTAACAATGAGCAAAAATCTGAAAATATTTCTCGGAAAGAGAAGAAAGGGATGGCTGGAAAGCATGACCTGGAGGAGTCCTTGCCCTTTGAGAGAGATTCGGGGGATGGCAGTTTGAATTCTGAAGCTTCAGTACAAGAAGAAAATGGGACTTTTCCTAGAAGTAATCAATGTCTTCAGAGTATAAATAGTAGATTGAGCTGTATACTGGATAGTTTGCACCTGAATAGTGTGGTGGATAAATTAGACATTGCCGATAATGTGATAGTTAGGAGATTAAGGTTTTCATTGTTTTCCATGTTCACAGCAATTTCAGAGTGGCTAATCAGGCAGACTCCATTTTTTGTATCTCTTAGAACCATCATGTTTAAAGCCTATCATAATTTCAGAACGAAAGTTGTGCAGACATATCCTGTTATTCTGAAGTGGCTCAAGCATTTTGGAAATGTAATGCTCCTATTATCAGTATTTTGGTTGGACTGTGCACTTCGGGGTATTGATTCTTTTGCACGAATGGGTACAACGCCGTTCTTCTCTGTTATATGGTGTAGCATATTTTCCGTGATTAGTATGATAGGGGTGCTCAAGTTTCTTGCTGTCCTGGGCCTGGCTGCCTTGATTGGATTTTTTCTTGGGCTCATGCTTGCAATCTTGGTAGTTGCAATCATTGGAGTTGTTATCTTGTGGTTTTGTGGTAGCTTTTGGACAACGGTATTTTTCATCATCCTTGGAGGATTGGCATTTATGTTCAGTCATGAACGGGTGGCACTACTTATCACCACAGTGTATTCTGTCTATTGTGCATGGCTGTATGTTGGGGGGCTTGGTTTGCTATTGGCTTTCAATTTAGCTTTTATATCTAGTGATGTCCTGATATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCCAATCCTTTTGAACAAAGAGCTGGAATGCATGGTCAACCAGGATTTAGTGATGGATCAACACATGCTTCTTCCTCTGAAAATGGACCGGGACCATCTGCAGATCGCAGCGCTGGCATCCCTTCAACTAGTGGGGTTGATTCTGATGTAACTTCTGAAGAGGAAGTCGTTCGTTTGTTGAACTGCTCTGATCACTATGCAGCACTGGGCTTGATGCGGTATCAAAATATAGATGTTTCAATACTAAAGCGGGAATATAGGAAAAAGGCAATGTTGGTACATCCTGACAAAAATATGGGTAATGAAAAGGCTGCTGAAGCATTTAAGAAACTTCAAAATGCGTATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAGGAGCTTTTAAGTGTATTTCGTAGATTTCATGATGCTCCTCATATGAATGGTAGGCATGGATTCTTTCCTTCAGGATTTGCCCGGCCTGATGCAGATGGCAAGGATCCATTTGGTGATTCAAGGCGAATAGCCTGCAAAAGGTGTGGTGGTTTTCATGTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGCCAAGATTTTCATCAAGCTAAGGATGGGGATGGATGGGTGGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTGCAGAAGGTGGATGCTCCTTCAGCATATGTGTGCGCTGGTAGCAGGATATACGATGCCTCCGAATGGTATATCTGTCAGGGCATGAGATGTCCAGCGAATACACATAAGCCAAGTTTCCATGTTAACACCAGTTTAATGTCTAAGAATAATTCTGGCAAGGGGACTAGTTCAGCTCAAAGAGGTGGGCGGATGCCAACATCTAATATCGAAGAAACCATGACTGAGGAAGAATTCTTTGAATGGTTACAGAATGCAGTACAGGCAGGGGTCTTCGACAATTTTAGTGGCACTGCACCAGAGAGCCCATCTCCCAAATCTGGAAATGGGATGAAAAGTCCTGGCAGTAGTAGTGGTGGTGCCAGTGCGAGTGGCAGCAGCAAGAGAAAGAAAAAGGGAAAAAAGCAATGGTGA 2214 0.4322 MARKGNQQKNGVDRHGLNHKKGVSGGVLPGMKGHGKEGPVKVFPREELAEGDSGAARTACDATSSGDDFNNEQKSENISRKEKKGMAGKHDLEESLPFERDSGDGSLNSEASVQEENGTFPRSNQCLQSINSRLSCILDSLHLNSVVDKLDIADNVIVRRLRFSLFSMFTAISEWLIRQTPFFVSLRTIMFKAYHNFRTKVVQTYPVILKWLKHFGNVMLLLSVFWLDCALRGIDSFARMGTTPFFSVIWCSIFSVISMIGVLKFLAVLGLAALIGFFLGLMLAILVVAIIGVVILWFCGSFWTTVFFIILGGLAFMFSHERVALLITTVYSVYCAWLYVGGLGLLLAFNLAFISSDVLIYFLKKNIDQQSRSNPFEQRAGMHGQPGFSDGSTHASSSENGPGPSADRSAGIPSTSGVDSDVTSEEEVVRLLNCSDHYAALGLMRYQNIDVSILKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHDAPHMNGRHGFFPSGFARPDADGKDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCAGSRIYDASEWYICQGMRCPANTHKPSFHVNTSLMSKNNSGKGTSSAQRGGRMPTSNIEETMTEEEFFEWLQNAVQAGVFDNFSGTAPESPSPKSGNGMKSPGSSSGGASASGSSKRKKKGKKQW* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1258 737 MobiDBLite consensus disorder prediction 693 737 - -
Pvu6g1258 737 ProSitePatterns Nt-dnaJ domain signature. 480 499 IPR018253 -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 1 121 - -
Pvu6g1258 737 Pfam DnaJ domain 436 500 IPR001623 -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 693 725 - -
Pvu6g1258 737 Gene3D DnaJ domain 423 513 IPR036869 -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 376 421 - -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 73 100 - -
Pvu6g1258 737 SMART dnaj_3 435 495 IPR001623 -
Pvu6g1258 737 PRINTS DnaJ domain signature 458 473 IPR001623 -
Pvu6g1258 737 PRINTS DnaJ domain signature 475 495 IPR001623 -
Pvu6g1258 737 SUPERFAMILY Chaperone J-domain 431 526 IPR036869 -
Pvu6g1258 737 ProSiteProfiles dnaJ domain profile. 436 503 IPR001623 -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 644 666 - -
Pvu6g1258 737 Pfam Cleavage inducing molecular chaperone 546 643 IPR032843 -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 389 421 - -
Pvu6g1258 737 CDD DnaJ 436 492 IPR001623 -
Pvu6g1258 737 PANTHER OS03G0832900 PROTEIN 1 737 - -
Pvu6g1258 737 PANTHER OS03G0832900 PROTEIN 1 737 - -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 38 52 - -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 105 121 - -
Pvu6g1258 737 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1258 Pvu-Chr6 23537457 23543997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1258 1 703 Miscellaneous Gene Families AT5G49580 50.778 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1258 K09534 - gmx:100789594 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1258 6 23537457 23543997 Pvu6g1258 6 23537457 23543997 ECH