Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1257 ATGGACGCAAATTCACTGCTCCAGGGTTCTTCTCTTGCACCTTCTTATCCCCTCCCTAAGCTTTCAAAAACCACCATGACGACAACCAACTGCGTTAGATTCAATTTCAACCACAACCCATGCGTCATATTCGCTAATGGGTACCCTACTTCTTCTTCTCTGCTTCCATTTTCTATTCACAATAAGCCCAGTAAATCAGCATCACTGATTGTGAGTGCCCGCAAGAAAGACAAGAAATATGATACCCATAGCTCCGTACCCCAACCTGACGAGTCCACGGGTTTCTTCCCCGAAGCTATTTTACTTAAAAAGAGATCGGTTGAGGAAGAAGGGAAGCTTCTCCCGGAGTTTGAAGATGCCGAGGAAAGAGAACTCTTTGAAACGCTAATGCTTGAGCTTGACAGTGATATGAATGCTGAAATATTGCGCCACTATGAGATCATGTACTTAATTCATGAGAAGCATGAAGATGAGGTTGCTGCTGTCAACCAGAAAATTCAAGACTTTCTGAGGGAGAAGAAAGGGCAGGTTTGGAGGCTGAATGATTGGGGTATGAGAAGGTTAGCTTACAAAATAAAGAAAGCTAATAAAGCCCACTACATGTTGATGAACTTCGAGTTGGATGCAAAATATATCAACGACTTGAAGACTTTGTTGGACCAAGATGAAAGAGTTATTCGGCATCTTGTGATAAAGAGGGACGAGGCAATCACTGAAGATTGCCCTCCACCTCCGGAGTTTCATACTCTGCGTGCAAATGCAGACGATATCGAGGATGAAGAATTTGATGAAGAGTATGACGATGACTGGGATGGTGAAGACGAGGTTGATGGTGATGATGATGGTATTATATATGTAGATGGTGATGAAGATGAAGACATGGATTCAAGAAATGAGACATCTGCAAATGTTACACTAGCAGAAGAAACAAGAGAGTTGAGGGCTGAGAACGTAGGTAGGTAA 963 0.4278 MDANSLLQGSSLAPSYPLPKLSKTTMTTTNCVRFNFNHNPCVIFANGYPTSSSLLPFSIHNKPSKSASLIVSARKKDKKYDTHSSVPQPDESTGFFPEAILLKKRSVEEEGKLLPEFEDAEERELFETLMLELDSDMNAEILRHYEIMYLIHEKHEDEVAAVNQKIQDFLREKKGQVWRLNDWGMRRLAYKIKKANKAHYMLMNFELDAKYINDLKTLLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRANADDIEDEEFDEEYDDDWDGEDEVDGDDDGIIYVDGDEDEDMDSRNETSANVTLAEETRELRAENVGR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1257 320 MobiDBLite consensus disorder prediction 256 296 - -
Pvu6g1257 320 MobiDBLite consensus disorder prediction 251 320 - -
Pvu6g1257 320 Pfam Ribosomal protein S6 144 232 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pvu6g1257 320 TIGRFAM S6: ribosomal protein bS6 143 234 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pvu6g1257 320 ProSitePatterns Ribosomal protein S6 signature. 184 193 IPR020815 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pvu6g1257 320 Coils Coil 152 172 - -
Pvu6g1257 320 CDD bS6 144 233 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pvu6g1257 320 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 105 253 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pvu6g1257 320 Gene3D - 137 240 IPR014717 -
Pvu6g1257 320 SUPERFAMILY Ribosomal protein S6 142 242 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pvu6g1257 320 Hamap 30S ribosomal protein S6 [rpsF]. 142 235 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pvu6g1257 320 PANTHER 28S RIBOSOMAL PROTEIN S6, MITOCHONDRIAL 105 253 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1257 - - gmx:100790128 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1257 6 23533393 23536465 Pvu6g1257 6 23533393 23536465 ECH