Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1234 ATGACCATCACAAACTCTTGTCCTCTGATACTCTTCCTGTGCTTCACTATGCTCCCTTTTCTATTTTGTGACGAGGGAATGCATTCAGGTCAATCGAACCAGATTTTGCATTCTTTCCAGGAAGACAGAAACGGGTCCATAACAGTGTCAGTGAAAGCAGAACATGCTGCCTCTAGAAAAAACTGGTTGCATGGTTCTTGCACAAGCAAAGACATAAGCATCTCACAAAGCACAAGTTCTACATCAGGAATACCACAGTTCATTGTGCAGATTGTTAACACCTGTGTTTCTGGATGTGCTCCCCGTGACATCCACCTCCACTGTGGTTGGTTTGCTTCTGCAAGAATAGTGAACCCCAGATTGTTCAAAAGGATCTCCTATGATGATTGCTTGGTCAATGGAGGGAACCCTTTAGCCTCTAGCCAGATAATCAGAATCACATATTCCAATTCTTTCATGTACCCTCTTGCTTTCAAGTCTGCCAAATTTTGCTGA 495 0.4323 MTITNSCPLILFLCFTMLPFLFCDEGMHSGQSNQILHSFQEDRNGSITVSVKAEHAASRKNWLHGSCTSKDISISQSTSSTSGIPQFIVQIVNTCVSGCAPRDIHLHCGWFASARIVNPRLFKRISYDDCLVNGGNPLASSQIIRITYSNSFMYPLAFKSAKFC* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1234 164 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 29 164 IPR040361 -
Pvu6g1234 164 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 29 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1234 Pvu-Chr6 23272101 23273232 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1234 - - var:108341572 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1234 6 23272101 23273232 Pvu6g1234 6 23272101 23273232 ECH