Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1231 ATGACAAGTGCTAGGAGACTGGGCGTGGCCGTTGATTTCTCATCGTGCAGCATCAAAGCACTGCAATGGACGGTGGATAACGTGGTCAAAGAAGGGGATCACCTCATTCTTATCGTGGTTCGCCAACCTGCCCATTACGAGCACGGCGAGATGCAGCTCTGGGAAACCACTGGCTCACCTCTCATACCTCTGTCTGAGTTCTCTGAACCTGCGGTCATGAAGAAATACGATTTCAAACCCGAACCCGAAGTAATTGATATAGTCCAAACTGCTGCCAGGCAAAAAAGTATTATGGTGATAATGAAGATCTTTTGGGGAGATGCTCGTGAGAAGTTATGTGACGCAGTTACTCAGGTACCTCTAGACTCCCTTACCATGGGGAACAGAGGCCTTGGCCCTCTCCAAAGGGTCATAATGGGCAGCGTCAGCAACTTTGTAGTGAATAATGCCTCCTGTACTGTCACTGTGGTGAAGAGTTAA 480 0.4875 MTSARRLGVAVDFSSCSIKALQWTVDNVVKEGDHLILIVVRQPAHYEHGEMQLWETTGSPLIPLSEFSEPAVMKKYDFKPEPEVIDIVQTAARQKSIMVIMKIFWGDAREKLCDAVTQVPLDSLTMGNRGLGPLQRVIMGSVSNFVVNNASCTVTVVKS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1231 159 CDD USP_Like 6 157 - -
Pvu6g1231 159 PANTHER IMP2'P 4 158 - -
Pvu6g1231 159 PRINTS Universal stress protein signature 4 22 IPR006015 -
Pvu6g1231 159 PRINTS Universal stress protein signature 118 130 IPR006015 -
Pvu6g1231 159 PRINTS Universal stress protein signature 136 158 IPR006015 -
Pvu6g1231 159 Pfam Universal stress protein family 5 158 IPR006016 -
Pvu6g1231 159 Gene3D HUPs 2 159 IPR014729 -
Pvu6g1231 159 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1231 Pvu-Chr6 23230158 23231440 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1231 - - gmx:100816534 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1231 6 23230158 23231440 Pvu6g1231 6 23230158 23231440 ECH