Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1187 ATGGAATGGTCCACAACATGTGCTACAATGGCTTACCTTGATGCCCTTCAACTGTGTAATAACCATAAAAGACAGTATGGTTCTTGGAAAGTGCAACAGCAGGGAAGCAATGAATTCGTATCAGCATTAGCAGCTGGTATGAAAGCAAAACTTATAGTAGAAGTGGCACCACGAGCATCTCCATCAACAATAGCCCTGGCAGCAGCTGCAAGACGAACTGGTGGAAGGTTGGTGTGTATTCTCCCGGAAATGGTCCTTGACGAGTCAAAAGAAGTTATTAGGAAGTCGGGTCTAAAGGACCAAGTAGAATTTAGAACTGAAGATCCATCAAACATATTGCCATATTATGAAAATATTGATTTCTCTTTAGTTGATTGCAAAGATGAAAACTTTGCAAGGTTGCTCAACTTGCTAGATCTCAACCCTATGAGATCTGTAGTGGTGGCAAGCAATTTGGTTGGGAAAACAAAAGGGTTGGGAGGCTATGTAAAAAGAAAGGATGAGAAAGTAGCAGTGAGATCTCTGAAGCACCCTATAGGTAAAGGTATGGAAGTGACTATGCTTTCCAAGAATGATGAAACTGACAAGAGAGCTGGGGTCAGAGACGGTAGTAGCAGAAAAATGGGTAAGAGTAAGTGGGTTGCCAAGCTTGATGAGGAAAGTGGTGAGGAGCACATATTCAGGGTTCCCCAGATAGACATGTTGTGGAATTAA 714 0.423 MEWSTTCATMAYLDALQLCNNHKRQYGSWKVQQQGSNEFVSALAAGMKAKLIVEVAPRASPSTIALAAAARRTGGRLVCILPEMVLDESKEVIRKSGLKDQVEFRTEDPSNILPYYENIDFSLVDCKDENFARLLNLLDLNPMRSVVVASNLVGKTKGLGGYVKRKDEKVAVRSLKHPIGKGMEVTMLSKNDETDKRAGVRDGSSRKMGKSKWVAKLDEESGEEHIFRVPQIDMLWN* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1187 237 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 138 IPR029063 -
Pvu6g1187 237 PANTHER DUF1442 FAMILY PROTEIN 1 231 - -
Pvu6g1187 237 Gene3D Vaccinia Virus protein VP39 11 193 IPR029063 -
Pvu6g1187 237 PANTHER DUF1442 FAMILY PROTEIN 1 231 IPR009902 -
Pvu6g1187 237 Pfam Protein of unknown function (DUF1442) 3 228 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1187 Pvu-Chr6 22879041 22880496 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1187 - - pvu:PHAVU_006G113200g 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1187 6 22879041 22880496 Pvu10g1192 10 37970720 37972270 PCT