Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1135 ATGGCAGCGTGGGGTGCACATTCAATGTTGTTATCCCATGGGGAAGGCACTGGCACTCCCAATGTATCTTTAAAAGCAGGACTTAAGGTTAGAGGTGATTTAAGGTTTCACAGAACAAGAGAGTTTAAATATGCTCCTCGTATGGTAGTGCTCAAAGTGTTTTCCACCGCGAGAAAGCCAATACGCTTGTGCTTGTTAAGGCCTTGTTGTAGTTTAGGGGGGAAACACAACCAAGGGACAGATTATTCTTCACCCACTACTACACAAATACCACGTATATTCAAATTCGTTGCTGATCGAATGCTTGTTGTTCTCAAAGATTGGAATTGGAGTAATTTACGCATCATGGCAGTAGCTGGCATATTGGTATCAGTTTTAATGATCACTCCATCAGCTGATGCTGTTGATGCTCTTAAAACTTGTTCTTGCTTATTGAAGGATTGCAGGTTGGAACTGGCTAAGTGTCTTTCAAACCCATCTTGTGCTGCCAATATTGCCTGTCTCCAAACTTGCAACAATCGACCTGATGAGACTGAATGCCAAATTAAATGCGGGGACCTGTTTGAAAACAGTGTGGTTGATGAATTCAATGAGTGTGCAGTCTCACGGAAGAAATGCGTGCCTAAGAAATCTGATTTGGGAGAATTTCCTGCTCCAAATCCTGATTTCCTTGTTAATAGCTTCAACATTGCGGATTTCAGTGGCAAATGGTTCATCACTAGTGGCTTAAATCCTACCTTTGATGCCTTTGACTGCCAATTACATGAGTTTCACACAGAATCCAATAAGCTTGTGGGTAATTTGACATGGAGAATACGGACTCCAGATGCTGGATTTATTACTAGGTCCGCTGAGCAGAAATTTGTTCAAGATCCTTCCTATCCTGGAATCCTCTACAATCATGACAACGAGTATCTTCACTATCAAGATGACTGGTATATTTTGTCATCAAAGATTGAGAATAAACCAGATGACTACGTATTTGTATACTACCGAGGCAGAAACGATGCATGGGATGGCTATGGAGGTGCTGTTGTGTACACAAGAAGTGCAGTGTTGCCAGAATCTATAGTTCCTGAACTTGAAAAAGCAGCCAAGAATGTGGGAAGAGACTTTAGCAAGTTCATAAAGACAAATAACACATGTGGACCAGAGCCTTCCCTGGTGGAAAGGTTGGAGAAAAAGGTAGAGGAAGGAGAGGAGATCATTGTGAGGGAAGTTGAACAGTTAGAAGAAGAGGTGGAGAAGGTGGAGAAAACGGAGGTTTCACTGTTTCAGAAGTTGGTAGAAGGGTTCAAAGTATTTCAAGAAGATGAGGAAAACTTCTTGAAAGGGCTTTCAAAAGAAGAAATGGAGATACTTAATGACCTCAAAATGGAAGCCAGTGAAGTAGAAAAGCTCTTTGGAAATGCCTTGCCCATAAGGAAACTAAGATAA 1437 0.4154 MAAWGAHSMLLSHGEGTGTPNVSLKAGLKVRGDLRFHRTREFKYAPRMVVLKVFSTARKPIRLCLLRPCCSLGGKHNQGTDYSSPTTTQIPRIFKFVADRMLVVLKDWNWSNLRIMAVAGILVSVLMITPSADAVDALKTCSCLLKDCRLELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDLGEFPAPNPDFLVNSFNIADFSGKWFITSGLNPTFDAFDCQLHEFHTESNKLVGNLTWRIRTPDAGFITRSAEQKFVQDPSYPGILYNHDNEYLHYQDDWYILSSKIENKPDDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELEKAAKNVGRDFSKFIKTNNTCGPEPSLVERLEKKVEEGEEIIVREVEQLEEEVEKVEKTEVSLFQKLVEGFKVFQEDEENFLKGLSKEEMEILNDLKMEASEVEKLFGNALPIRKLR* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1135 478 CDD lipocalin_VDE 212 386 - -
Pvu6g1135 478 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC 36 478 - -
Pvu6g1135 478 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 36 478 IPR044682 GO:0010028|GO:0046422
Pvu6g1135 478 Coils Coil 389 427 - -
Pvu6g1135 478 Pfam VDE lipocalin domain 140 380 IPR010788 GO:0046422
Pvu6g1135 478 ProSitePatterns Lipocalin signature. 229 240 IPR022272 -
Pvu6g1135 478 Gene3D - 211 392 IPR012674 -
Pvu6g1135 478 SUPERFAMILY Lipocalins 217 386 IPR012674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1135 K09839 - gmx:100778118 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1135 6 22488320 22492102 Pvu6g1135 6 22488320 22492102 ECH