Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1129 ATGTACCAACCGAGTAGTGGGGGAGAGAGAGAAAGATTCATCTTCCCTGTGTTCTTTTTCTTCTATTCTTGGCGCTCTGGTTTTCTCCAAGAATTGACTCAGCAATTGATGATGGCTGTGCCCGTCGAGGAAGCCATTGCTGCTCTATCCACATTCTCGCTCGAGGATGAGCAACCGGAGGTGCAGGGACCTGGAGTGTGGGTGTCAACTGAGAGAGGTGCAACAGAAAGTCCAATAGAGTACAGCGATGTTTCTGCTTACCGACTATCTCTGTCCGAGGACACAAAAGCTCTCAATCAGTTGAGTGTCCTTAGCCAAGAGGGAAAGGAGATGACATCAGTGCTTTACACTTATCGCAGTTGCGTCAAAGCACTTCCTCAGCTACCTGATTCTATGAAGCAAAGTCAAGCAGACTTGTATTTGGAGACATATCAAGTTCTGGATTTGGAAATGAGTCGTCTGCGTGAAATTCAGCGATGGCAAGCATCAGCTTCCTCAAAATTAGCTGCTGACATGCAACGTTTTTCTAGGCCTGAACGACGCATTAATGGCCCTACAATATCTCATTTGTGGTCTATGTTGAAGTTGCTTGATGTTTTGGTGCAACTTGATCATCTTAAAAATGCTAAGGCAAGCATACCTAATGACTTTTCATGGTATAAAAGGACTTTTACACAAGTCAGTGGTCAGTGGCAAGACACTGATTCAATGAGGGAGGAATTAGATGATTTGCAGATTTTCTTGAGCACAAGATGGGCTATTTTGTTGAATTTGCATGTGGAGATGTTCCGTGTGAACAATGTTGAAGACATTCTTCAAGTTCTTATAGTCTTTGTTGTAGAGTCTTTAGAATTGGACTTTGCACTTCTCTTTCCAGAGCGCCACATTCTCTTGCGTGTTTTGCCTGTTCTTGTTGTCCTAGTGACATCATCAGAGAAAGATAGTGAGTCTCTGTACAAGAGGGTGAAAATCAACAGACTGATGAATATATTTAAGAATGAGGCAGTCATTCCTGCATTTCCAGATCTGCATTTGTCTCCAGCTGCAATATTGAAGGAATTATCAACTTACTTTCCAAAATTTTCTTCCCAAACTCGCCTTCTCACACTTCCGGCACCTCATGAGCTTCCACCTCGCGAGGCACAAGAATATCAGAGACATTATTTGATCATAAATCATATTGGAGCCATCCGTGCTGAGCATGATGATTTTGTAATTCGATTTGCTTCTGCAATGAATCAGCTGTTATTGTTAAAGTCAACTGATGGTTCTGATGTTGAATGGAGCAAAGAAGTCAAGGGGAACATGTATGATATGATTGTTGAAGGTTTTCAGCTATTAAGCAAATGGACTGCACGCATATGGGAACAATGTGCTTGGAAATTTTCTCGACCATGCAAAGATGCATCCCCATCATTCTCTGACTATGAAAAGGTAGTAAGATATAATTACAGTGCAGAAGAAAGGAAAGCACTGGTTGAACTTGTGAGCTACATAAAGAGTGTTGGATCTATGATGCAGCGGTGTGATACAGTGGTTGCTGATGCTTTATGGGAAACAATACATGCTGAGGTCCAGGATTTTGTCCAAAACACATTAGCTATTATGTTGCGGACTACCTTCAGAAAGAAGAAGGACCTCTCTAGGATTCTTTCAGATATGCGGACCCTCTCAGCTGATTGGATGGCTAATACAAACAAATCAGAATCTGAGTTACAGTCTTCACAGCATGGAGGTGAAGAAAGCAAAGCAAACATATTTTATCCAAGAGCAGTTGCCCCAACTACTGCTCAGGTGCACTGCTTGCAGTTCTTAATATATGAGGTGGTTTCTGGTGGTAATCTTAGGAGGCCAGGTGGACTCTTTGGCAATAGTGGCTCAGAAATCCCAGTTAATGATTTAAAACAGCTGGAGACATTTTTTTACAAGCTTGGTTTTTTCCTTCATATTTTAGACTACTCAGCCACTGTTGCAACATTGACAGATCTTGGTTTCTTATGGTTTAGAGAATTCTATTTAGAGTCTTCACGAGTCATTCAGTTTCCAATTGAGTGCTCTCTTCCCTGGATGTTGGTGGAATGTGTTCTTGAGTCACCAAATTCTGGTCTTCTAGAGAGTGTTCTGATGCCATTTGACATCTACAATGATTCAGCTCAGCAAGCTTTGGTGTTGCTGAAGCAACGGTTCCTATACGATGAAATTGAGGCTGAGGTGGATCATTGTTTTGATATATTTGTTACAAAATTATGTGAAACCATTTTCACATATTACAAAAGTTGGGCAGCAAGCGAATTGCTTGATCCTTCATTCCTCTTTGCTTCAGACAATGCAGAAAAGTATGCTGTGCAACCCATAAGGCTCAATATGCTGCTTAAAATGACTAGAGTGAAGCTTCTTGGAAGGATGATTAATTTGCGAAGTTTGATTACTGAAAGGATTAACAAGGTTTTCCGTGAAAATATCGAGTTTCTGTTTGATCGCTTTGAATGCCAGGATCTTTGTGCCATAGTGGAATTAGAGAAGTTGTTGGAAGTCCTAAAACATTCCCATGAACTACTGTCTAGAGATCTTTCTGTAGACTCTTTCAGTCTCATGTTGAACGAGATGCAAGAGAACATCTCCCTTGTATCATTTTCTAGTCGACTGGCCTCACAGATTTGGTCAGAGATGCAAAGCGATTTTTTGCCAAATTTCATTCTCTGCAATACTACTCAACGTTTTATCAGATCATCAAGGACTGTTCCTGTTCAAAAGCCATCTGTACCCTCTGCTAAGCCTAGTTTCTATTGTGGTACTCAAGATTTGAATTCTGCCCATCAAAGTTTTGCACGACTGCATAGTGGATTCTTTGGAATACCTCACACATTTTCTATTGTTCGACTTCTGGGATCTCGATCATTACCTTGGCTTATTAGAGCCCTTCTTGATCACATATCAAACAAGATTACTTTGCTTGAGCCAATGATTACAGGATTACAAGAATCTTTGCCAAAATCAATTGGACTTCTTCCTTTCGATGGAGGTGTGACAGGTTGTGTGAGACTTGTTAAGGAACATCTTAACTGGGGGACCAAATCGGAGCTAAAAGCTGAGGTTCTTCATGGCATAAAAGAGATTGGAAGTGTATTATATTGGATGGGGCTTCTAGATATTGTGTTGAGAGAAAAGGATTCTATGGATTTCATGCAAACTGCTCCTTGGCTGGGCTTGCTTCCTGGAGGAGATGGTCAAATAGTAACTTCTCAAGATGGTGAACACAGCCCTGTTGTTAGTCTCTTTAAATCAACAGCTGCTGCAATGATTTCATACCCTGGTTGCCCATCACCTACCTCTTTTCATATTATGTCAAAACAAGCAGAAGCAGCAGCTTGCCATGTTTCTTTGTATAAATAA 3393 0.4103 MYQPSSGGERERFIFPVFFFFYSWRSGFLQELTQQLMMAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTKALNQLSVLSQEGKEMTSVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREIQRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFVVESLELDFALLFPERHILLRVLPVLVVLVTSSEKDSESLYKRVKINRLMNIFKNEAVIPAFPDLHLSPAAILKELSTYFPKFSSQTRLLTLPAPHELPPREAQEYQRHYLIINHIGAIRAEHDDFVIRFASAMNQLLLLKSTDGSDVEWSKEVKGNMYDMIVEGFQLLSKWTARIWEQCAWKFSRPCKDASPSFSDYEKVVRYNYSAEERKALVELVSYIKSVGSMMQRCDTVVADALWETIHAEVQDFVQNTLAIMLRTTFRKKKDLSRILSDMRTLSADWMANTNKSESELQSSQHGGEESKANIFYPRAVAPTTAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQLETFFYKLGFFLHILDYSATVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVECVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETIFTYYKSWAASELLDPSFLFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLITERINKVFRENIEFLFDRFECQDLCAIVELEKLLEVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMQSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSAKPSFYCGTQDLNSAHQSFARLHSGFFGIPHTFSIVRLLGSRSLPWLIRALLDHISNKITLLEPMITGLQESLPKSIGLLPFDGGVTGCVRLVKEHLNWGTKSELKAEVLHGIKEIGSVLYWMGLLDIVLREKDSMDFMQTAPWLGLLPGGDGQIVTSQDGEHSPVVSLFKSTAAAMISYPGCPSPTSFHIMSKQAEAAACHVSLYK* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1129 1130 PIRSF CYFIP 33 1128 IPR008081 GO:0030833|GO:0031267
Pvu6g1129 1130 Pfam CYRIA/CYRIB Rac1 binding domain 193 255 IPR009828 GO:0031267
Pvu6g1129 1130 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 171 200 IPR008081 GO:0030833|GO:0031267
Pvu6g1129 1130 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 294 309 IPR008081 GO:0030833|GO:0031267
Pvu6g1129 1130 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 473 491 IPR008081 GO:0030833|GO:0031267
Pvu6g1129 1130 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 660 678 IPR008081 GO:0030833|GO:0031267
Pvu6g1129 1130 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 727 749 IPR008081 GO:0030833|GO:0031267
Pvu6g1129 1130 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 785 815 IPR008081 GO:0030833|GO:0031267
Pvu6g1129 1130 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN 2 40 1122 - -
Pvu6g1129 1130 Coils Coil 836 856 - -
Pvu6g1129 1130 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED 40 1122 IPR008081 GO:0030833|GO:0031267
Pvu6g1129 1130 Pfam Cytoplasmic Fragile-X interacting family 436 1122 IPR008081 GO:0030833|GO:0031267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1129 K05749 - gmx:100775991 2084.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1129 6 22425284 22442830 Pvu6g1129 6 22425284 22442830 ECH