Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1127 ATGGCAGTTCCCTCAGGTTTTGTTGGCACCATGCTGATACTTTTCGGTATAGCTTTGGTAGCTGGGGTTGAGGCCAAGTCCAGGGCTTTCTTTGTGTTTGGAGATTCACTCGTTGACAGTGGTAACAACAATTACTTGGCCACCACTGCACGAGCCGATTCTCCTCCTTATGGCATTGACTATCCAACTGGCAAAGCAACTGGTCGCTTTTCCAATGGCCTCAACATTCCTGATCTTATCAGTGAAGGAATGGGTGGTGAATCCGTGTTGCCATATTTGAGTCCACAACTAAAAGGTGACAATCTTCTGAATGGAGCCAACTTTGCTTCCGCTGGAATTGGCATTCTTAACGACACTGGAGCTCAGTTTCTAAACATAATCAGAATGTATAGACAGTTGGACTACTTTGAAGAATACCAGCAACGAGTGTCCATTCTAACTGGAGTAGCGCGGGCAAAGAAACTTGTGAACCAAGCATTGGTCCTCATCACTGTTGGTGGCAACGATTTTGTAAACAATTACTACTTGGTACCTTATTCTGCAAGGTCTCGCCAGTTTTCGCTGCAGAATTATGTCAAATATCTCATTGTGGAGTACCGTAAACTCTTGATGAGGCTGTATGATCTGGGAGCTCGAAGAGTAATCGTGACAGGAACTGGACCAATGGGTTGTGTTCCAGCAGAACTGGCCTTGCGTGGAACAAGTGGAGGATGTTCTGCTGAACTTCAACGAGCTGCATCACTCTACAACCCTCAACTGCAACACATGATTCAAGGACTCAACAAGAAAATTGGCAAAGACGTTTTTATCGCTGCAAATACAGCACTGATGCACAATGATTTCGTAAATAACCCTGCAGCATATGGATTTACTACATCAAGAATTGCTTGCTGTGGGCAAGGACCGTACAACGGGATTGGGTTATGCACACCACTCTCAAACTTGTGCCCAGACAGAAACTTGCATGCGTTTTGGGATCCATTCCATCCATCCGAAAAGGCAAGCAGAATCATTGTGGAGCAGATTATGTCGGGTTCTAAACGATACATGAAACCAATGAACCTCAGCACCGTCCTAGCACTGGATGCTACAAAATGA 1098 0.4517 MAVPSGFVGTMLILFGIALVAGVEAKSRAFFVFGDSLVDSGNNNYLATTARADSPPYGIDYPTGKATGRFSNGLNIPDLISEGMGGESVLPYLSPQLKGDNLLNGANFASAGIGILNDTGAQFLNIIRMYRQLDYFEEYQQRVSILTGVARAKKLVNQALVLITVGGNDFVNNYYLVPYSARSRQFSLQNYVKYLIVEYRKLLMRLYDLGARRVIVTGTGPMGCVPAELALRGTSGGCSAELQRAASLYNPQLQHMIQGLNKKIGKDVFIAANTALMHNDFVNNPAAYGFTTSRIACCGQGPYNGIGLCTPLSNLCPDRNLHAFWDPFHPSEKASRIIVEQIMSGSKRYMKPMNLSTVLALDATK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1127 365 Pfam GDSL-like Lipase/Acylhydrolase 31 342 IPR001087 GO:0016788
Pvu6g1127 365 CDD SGNH_plant_lipase_like 29 346 IPR035669 -
Pvu6g1127 365 Gene3D SGNH hydrolase 22 347 IPR036514 -
Pvu6g1127 365 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 11 361 - -
Pvu6g1127 365 SUPERFAMILY SGNH hydrolase 31 343 - -
Pvu6g1127 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1127 Pvu-Chr6 22413981 22415806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g1127 29 359 Acyl Lipid Metabolism Gene Families AT4G10950 32.132 9.83e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1127 - - gmx:100813953 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1127 6 22413981 22415806 Pvu6g1127 6 22413981 22415806 ECH