Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1121 ATGTCTTCTACTCCTCCTACTCACCACCACCTTCTCCTTCTTGCTTTCCTCTTCCCCCTCCTTCTACAAACGCTTCAGGTTCACTCCAGCAACCTTAACAGCACAACTCACAGGAAAATCAGCAGCTTGAGACTCCAAAGGATTCAGAGACACTTGAACAACATTAACAAGACCCCTCTCCTCACCATACAGAGTCCAGATGGTGATCTCATAGATTGTGTTCACAAAAGAAAGCAACCTGCTTTAGATCACCCCCTTTTGAAGAACCACAAGATCCAGAGAGTTGCAAGTGAGATGCCAAAGGGTATGAAGGTGAGGGAAAACAGTGAGATGGGAATGCAAGAGTGGCACCGAAATGGGACGCTGTGTCCAAAAGGAACCGTTCCCATACGGCGGAGCACGGTGCATGACGTGTTGAGAGCAAAGTCTTTGTTTGACTTTGGAAAGAAACGACGACGCTTCTCTCTCGCACGCAGCGACGCCCCCGATGTTGTCACCGGCAATGGCCACGAGCATGCAATCGCATACACTGGATCAGCACAGGAGGTGTATGGGGCAAAGGCAACCATAAACGTGTGGGAACCTTCTATCCAAGTAGTGAACGAGTTCAGTCTCTCTCAAATTTGGATTCTTTCTGGTTCATTCGATGGCTCAGATCTTAACAGTATCGAAGCTGGATGGCAGGTCAGTCCGGAGCTTTATGGTGACACCAGACCCAGATTATTCACTTACTGGACGAGTGACTCCTATCAAGCAACAGGATGCTATAATCTTCTTTGTGCTGGTTTTGTGCAAACAAACAGTAGAATAGCCATTGGAGCTGCCATTTCCCCCATCTCATCTCCCGATGCTAACCAATACGACATCACCATCCTAATTTGGAAGGACCCCAAAATAGGGAATTGGTGGATGAGTTTCGGTGATGGAACACTGGTGGGGTATTGGCCTGTAGAGTTATTCACACACTTAGCCACACATGCGACCATGGTGGAGTGGGGTGGCGAAGTGGTGAACACACGTGCGAATGGGCAACACACCTCCACCCAAATGGGATCTGGGCACTTTGCTGGAGATGGTTTTGGGAAAGCAAGCTATTTTCGTAACCTTGAGATTGTAGACACCGACAATAGTCTTAGCTCGGTGCACAACATCTTAACCCTAGCTGAGAACACCAATTGTTATGACATCCAGAGCTCCTATAATAACGAATGGGGCACATACTTCTACTACGGTGGCCCAGGCAACAGTCCTCAGTGCCCCTGA 1263 0.4846 MSSTPPTHHHLLLLAFLFPLLLQTLQVHSSNLNSTTHRKISSLRLQRIQRHLNNINKTPLLTIQSPDGDLIDCVHKRKQPALDHPLLKNHKIQRVASEMPKGMKVRENSEMGMQEWHRNGTLCPKGTVPIRRSTVHDVLRAKSLFDFGKKRRRFSLARSDAPDVVTGNGHEHAIAYTGSAQEVYGAKATINVWEPSIQVVNEFSLSQIWILSGSFDGSDLNSIEAGWQVSPELYGDTRPRLFTYWTSDSYQATGCYNLLCAGFVQTNSRIAIGAAISPISSPDANQYDITILIWKDPKIGNWWMSFGDGTLVGYWPVELFTHLATHATMVEWGGEVVNTRANGQHTSTQMGSGHFAGDGFGKASYFRNLEIVDTDNSLSSVHNILTLAENTNCYDIQSSYNNEWGTYFYYGGPGNSPQCP* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1121 420 Pfam Neprosin activation peptide 62 176 IPR025521 -
Pvu6g1121 420 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 9 418 - -
Pvu6g1121 420 Gene3D - 194 308 - -
Pvu6g1121 420 Pfam Neprosin 201 413 IPR004314 -
Pvu6g1121 420 PANTHER CARBOXYL-TERMINAL PEPTIDASE 9 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1121 Pvu-Chr6 22324470 22328681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1121 - - gmx:100789333 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1121 6 22324470 22328681 Pvu6g1121 6 22324470 22328681 ECH