Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0994 ATGGACGATACTAGTAGAGCAGAACCCAGAGAGTTTTCAAGTCCTTTGCTTTCCACAGAATTACAAGCTTATCATGGTAACCATGGGGTTGAGTGTGAGGATAAGAGGCAGAAAGAAACCTGGTCAGTACCAGCTATTCTTATACTTACCACCCTTGTTGCTGTCTCTGGTTCTTACGTTTTTGGGTCTGCTGTGGGATATTCGTCTCCTGCTCAAAAGGGAATCATGGATGATCTCAATCTCGGCGTGGCTGAGTATTCAATTTTTGGATCAATACTGACTATTGGAGCAATGATTGGGGCCATAATAAGTGGTAGAATAGCAGACTACGCAGGCCGAAGAGCTGCTATGGGCTTCTCCGAAGTATTCTGCATCTTGGGATGGCTTGCCATAGCATTCTCAAAGGTTGGTTGGTGGCTTTATGTTGGAAGATTTTTGGTAGGATGTGGAATGGGCCTTCTATCTTATGTGGTACCGGTTTATCTAGCTGAAATAACACCCAAGAATCTCCGAGGGGGATTCACCACAGTTCATCAGTTAATGATTTGTTGTGGAGTATCATTAACTTATCTTATTGGAGCTTTCTTGAATTGGCGGATTTTGGCTCTAATAGGAACTATTCCTTGTCTCGTACAACTTTTGGGTCTATTTTTCATTCCCGAATCTCCTAGGTGGCTGGCAAAATTTGGTCACTGGGAAAGGAGTGAATCTGTTCTACAGCGTCTTAGAGGAAAGAATGCTGATGTTTCTCAAGAGGCCACTGAAATTAGAGATTTTACCAAAGCCCTTGAGAGAGAAACAGAAGCAACCATTTTTGGCTTATTTCAATTGCAGTATCTGAAGTCACTTACTGTAGGAGTGGGTCTGATGATACTGCAACAGTTTGGAGGGGTTAACGGCATTGCTTTTTATGCAAGTTCTATATTCATCTCTGCTGGATTTTCGGGAAGTATTGGAATGATAGCAATGGTTGCTGTTCAGATCCCAATGACAGCTTTGGGAGTGCTTTTGATGGATAAATCTGGGAGACGGCCACTTCTGCTGATCTCTGCATCGGGAACATGCTTAGGATGCTTTCTTGCAGCCCTGTCATTCTTCTTACAGGACCTACATAAATGGAAGGAAGTCAGTCCCATTATGGCACTTGCTGGTGTGCTGGTATACACAGGATCGTTCTCTCTTGGCATGGGGGGAATCCCCTGGGTTATAATGTCCGAGATATTCCCCATCAACGTGAAGGGTTCTGCAGGAAGTCTTGTGACTTTGGTTAGCTGGTTGTGTTCTTGGATTGTATCATATGCTTTTAACTTCCTCATGAGTTGGAGTTCGGCAGGAACTTTCTTCATCTTCTCTACCATATGTGGCTTCACGGTCCTGTTCGTGGCAAAACTAGTGCCAGAGACGAAGGGGCGTGCACTGGAAGAAATTCAAGCATCCCTCAAGAGATGA 1449 0.4417 MDDTSRAEPREFSSPLLSTELQAYHGNHGVECEDKRQKETWSVPAILILTTLVAVSGSYVFGSAVGYSSPAQKGIMDDLNLGVAEYSIFGSILTIGAMIGAIISGRIADYAGRRAAMGFSEVFCILGWLAIAFSKVGWWLYVGRFLVGCGMGLLSYVVPVYLAEITPKNLRGGFTTVHQLMICCGVSLTYLIGAFLNWRILALIGTIPCLVQLLGLFFIPESPRWLAKFGHWERSESVLQRLRGKNADVSQEATEIRDFTKALERETEATIFGLFQLQYLKSLTVGVGLMILQQFGGVNGIAFYASSIFISAGFSGSIGMIAMVAVQIPMTALGVLLMDKSGRRPLLLISASGTCLGCFLAALSFFLQDLHKWKEVSPIMALAGVLVYTGSFSLGMGGIPWVIMSEIFPINVKGSAGSLVTLVSWLCSWIVSYAFNFLMSWSSAGTFFIFSTICGFTVLFVAKLVPETKGRALEEIQASLKR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0994 482 SUPERFAMILY MFS general substrate transporter 33 477 IPR036259 -
Pvu6g0994 482 CDD MFS_GLUT6_8_Class3_like 48 475 IPR044775 GO:0008643|GO:0051119
Pvu6g0994 482 ProSitePatterns Sugar transport proteins signature 1. 104 120 IPR005829 GO:0016021|GO:0022857|GO:0055085
Pvu6g0994 482 Pfam Sugar (and other) transporter 52 478 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu6g0994 482 Gene3D MFS general substrate transporter like domains 40 482 IPR036259 -
Pvu6g0994 482 PRINTS Sugar transporter signature 58 68 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu6g0994 482 PRINTS Sugar transporter signature 141 160 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu6g0994 482 PRINTS Sugar transporter signature 293 303 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu6g0994 482 PRINTS Sugar transporter signature 382 403 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu6g0994 482 PRINTS Sugar transporter signature 405 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu6g0994 482 PANTHER - 36 481 - -
Pvu6g0994 482 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 469 IPR020846 GO:0022857
Pvu6g0994 482 PANTHER GENERAL SUBSTRATE TRANSPORTER 36 481 - -
Pvu6g0994 482 TIGRFAM SP: MFS transporter, sugar porter (SP) family 83 476 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0994 Pvu-Chr6 21301638 21305868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0994 53 411 Organic Solute Cotransporters AT1G54730 73.259 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0994 K03444 - gmx:100786465 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1529 1 40055052 40059510 Pvu6g0994 6 21301638 21305868 ECH
Pvu6g0994 6 21301638 21305868 Pvu6g0994 6 21301638 21305868 ECH