LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu6g0872	ATGGGTGCATGTTTGAGTAAGAAAAAAGGGTCTTCTACTTCTACCTCTTCCCCTCTTGCTGCGACCAAGTCAGCTTCCGCAGTTGCTGAGCTGAAGAATCCTTCTCTTATTGGTGTCAATGTTTCCAAACCCAAACTGGAAACTGACCCAGAGGTGAAACTGAAGAAGGAGAATTCTAAGAAAGTGGAAGAGAAACATGAGGCAGTGCCAGAAGTTGAGGGACATGTGAAAAAGGAGATATTCATCATAAAGCACAGGAAGAGCCATGATGATAGAGAAAGAAATTCCAAGTCGCCACCTTGCACAACTCAGCAGAATGTCACCACTGAATCAATGGGTGACATAGCCGCACAACCAGCAGCAACAAACATGGGTGTTGTAGCTGTGAGGACTTCAAGCTGCACCAAAGAGGAGGTGGATGCAATTCTCATACAGTGTGGGAGACTCAGCAGAAGCTCTTCAGGTAATGCTGTTGCTGCTTCTGGTGAACACAGAAGAAAGTACTCAGGTTCAAAGAGAAGTTATGATTTTGACCATTGTGACAATGACACCATTTCCAACGATGAGGACTCCAAGAAGGCCAATGCCAATGAAAGCAACAGTGATTTGTGTGAGGATGAAAGGCACCAACACCGGCTGCGACACCGCCAGTCACCTAGTCCGAGGCCTTCTTCTCAGGAAAGGAGAAGAAGAACACCAAGCAGGGAAAGAGACCAGCAACAACGGTCAAGCAGTAGAGAGAGGAGAGTTAGCAGATCTCCTGGAAGAAGGTCATCAGAGAACACATCTGCCAACGCAAGAAACAATAGCAACACTAGTTCTAGGCCTGGGAAAATGGTTTCAGTGCCTGCCACTGTTTCATCACTAGTGATGGATAAGAGTAACAATAATGGTGGTGGTGGGGAATCTGCAGCAACCACTGGCATCAAGAGGATAACAGTGAAGAGAAATGTTGGTGCTGCTTCACCGCGTTCTCAGTCTCCTGCAAGAGCAAATGGGAATGCAGCAAATGCTAATAAAGCATTCAACGAGAATCAGCCGCCCCCATCCCTTAGCCGTAGCTCTTCAAGGAAAGCAGAACAATCACCTTACAAAAGAAATCCATTGAGTGAGATTGAACCTAACTCCCTTGCTTTTCCACATTCAACAGCCAACAATAACAGCAGCAGGGTTCAAAACAGACCCAAAAAGGAATTTGAAACAGAGGCTATTCAGAGAACAAATAGCAGCAGAACTGCATTGGACAAGGGCATGACTGTAACTTACAATACAAAGGTGCAACCCGAGGGAGATATCAAAGTGCAGTCTTTAATTACTGATAATGCTGTGGTGAAAACAATGGTACCACCAGGGTTGGACAACCTAAAACCCCATAAATTAACAAGAAGCAGATCTTCAAGGCGATCCCAGGACTTAGACCTCAACCCTGAAGCTCTATTGAATCCTCCTCAGTCCTACGCTTCACTGCTCCTTGAAGATATCCAGAACTTCCATCAGAAGAGCACTCCACCTGTTTCTCTCCCAGCTTGTGTCACCAAGGCTTGCTCTATCCTCGAAGCTGTTGCTGAACTCAACTCTAACACCAACTTAAATTTCGGTGGTGCAGAGGACAGGAGAAGTCCACCAACTTTTCAGTGTAGTAGGAATGACTACAATGTTCCATTGACTGCCAATGATTATGGGAAGAGGGAGCCAGATGCTGAGGACCCAGTTGTGGAATCTATGTTAGTATTCAATGATGATGATGTGTTGGAATCAAGCTTGCATAAGTATGTGACAGTGAATAGGGGTGGTTCAGTCGGTGGGGTGGACATGGAAGACCAAGAGTCTTCAGGAAGCAACAGTTTCACTGTCGGTAATGGTCAACAGCAGTGGGGGATTTCTTCTTCTTCATGGGAGCCCAGCTCTGTTGAATCAAGAGATTGCTGGACTTCAAGATTGAACTACTCCAGAGAGGAAGGTCAGAAAAGTCCATTAGGCTTGGAAGGGAGTGTGTCATCTGAAACAGGATGTGATGTGGATGGAGCCAGGAAGAAGTTGAACAGCAACGGGAGGGAGTGTGATCATCAGCATGGGAGTGGGATAGGACGTGGAAGGCTTGGTGCCAATAAAGTACTTCACACCATACCTATTGTCACAGCATCTGCACCCACATAG	2157	0.4618	MGACLSKKKGSSTSTSSPLAATKSASAVAELKNPSLIGVNVSKPKLETDPEVKLKKENSKKVEEKHEAVPEVEGHVKKEIFIIKHRKSHDDRERNSKSPPCTTQQNVTTESMGDIAAQPAATNMGVVAVRTSSCTKEEVDAILIQCGRLSRSSSGNAVAASGEHRRKYSGSKRSYDFDHCDNDTISNDEDSKKANANESNSDLCEDERHQHRLRHRQSPSPRPSSQERRRRTPSRERDQQQRSSSRERRVSRSPGRRSSENTSANARNNSNTSSRPGKMVSVPATVSSLVMDKSNNNGGGGESAATTGIKRITVKRNVGAASPRSQSPARANGNAANANKAFNENQPPPSLSRSSSRKAEQSPYKRNPLSEIEPNSLAFPHSTANNNSSRVQNRPKKEFETEAIQRTNSSRTALDKGMTVTYNTKVQPEGDIKVQSLITDNAVVKTMVPPGLDNLKPHKLTRSRSSRRSQDLDLNPEALLNPPQSYASLLLEDIQNFHQKSTPPVSLPACVTKACSILEAVAELNSNTNLNFGGAEDRRSPPTFQCSRNDYNVPLTANDYGKREPDAEDPVVESMLVFNDDDVLESSLHKYVTVNRGGSVGGVDMEDQESSGSNSFTVGNGQQQWGISSSSWEPSSVESRDCWTSRLNYSREEGQKSPLGLEGSVSSETGCDVDGARKKLNSNGRECDHQHGSGIGRGRLGANKVLHTIPIVTASAPT*	719

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	319	363	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	46	73	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	653	699	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	256	303	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	7	23	-	-
	Pvu6g0872	718	PANTHER	OS02G0734667 PROTEIN	1	715	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	672	693	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	457	471	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	448	479	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	376	392	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	85	108	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	1	73	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	221	255	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	597	637	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	606	637	-	-
	Pvu6g0872	718	PANTHER	OS02G0734667 PROTEIN	1	715	IPR040412	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	165	213	-	-
	Pvu6g0872	718	MobiDBLite	consensus disorder prediction	148	412	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu6g0872	Pvu-Chr6	20233891	20236537	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu6g0872	-		-	gmx:102667523	997.653

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu6g0872	6	20233891	20236537	Pvu6g0872	6	20233891	20236537	ECH
	Pvu6g0872	6	20233891	20236537	Pvu8g2514	8	55712693	55715294	PCT