Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0645 ATGAAAGATCAAGAAGGTTCAGGAACTGACAGCACCCCTCTGTTGGAGACTCAGTATGCAGACTGTCATCATGTTGAAAGAACAGGAACCGTTTGGACTGCAGTGGCACACATAGTGACAGGAGTGATAGGGTCAGGAGTGTTGTCATTGGCATGGAGCATTGCACAACTTGGATGGGTTGGAGGGCCTGTCACAATCATTTTCTTTGCCTGCATCACTCTCCTCTCCTCTTTCCTTCTCAGCAACACCTACCGTTCTCCAGACCCTGAACATGGCCCTCAAAGGAGCTCCTCATACCTTGATGCTGTTAACCTCCATAAGGGAGAAGGGAATAGTCGTTTCTGTGGTGTTTTTGTGAACATAAGCTTGTATGGTTTTGGAATTGCTTATGTCATTACTGCTGCTATCAGCATGAGAGCAATCCAAATATCAAACTGTTACTATGACAAAGACGATGAAACAAAATGTGGATTTGCGGGTCCATATTTCATGCTTATTTTTGGGGCTATCCAAGTTGTTCTGTCACAGACACCCAACTTCCACAATATTCAGTGGTTGTCAATTGTAGCAGCAATTACGTCCTTTTTTTATGCTTTCATAGGAATGTGGCTTTCTGCTGGACAAATCAGGGAAAATGGATATGCTGAGGGTTCCATTCATGGAATCCCTACTTCCAGTGGAATGGATAAAGTATGGCTGGTTGCTCAAGCGCTTGGTGACATAGCATTCTCCTATCCATTCTCAGTGATTCTCATAGAAATACAGGATACTTTGAAGTCGCCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCAACAATATCTGTCATTGTCACAACATTTTTCTACCTCTCTTGTGGGTGTTTAGGATATGCAGCCTTTGGTAATGATACACCAGGAAACCTTTTAACAGGGTTTACATCTAATGCACAGCATTGGCTTGTAGACTTTGCCAATGCTTGTATAGTGATTCACCTGGTTGGTGCATATCAGGTGTATAGCCAGCCACTTTTTGCCAATGTTGAGAATTGGCTCCGTTTCAAGTTCCCGGACAGTGAATTTGTGAATCACGTATACTTCTTGAAGCTCCCTTTGCTGCCAGCTTTCCAACTAAATTTTCTCAGACTTTCTTTCAGAACTGCATATGTTGCATCAACAACTGTGATTGCAATGCTCTTTCCCTACTTCAATCAGATTTTGGGAGTTTTGGCTGGAATAATCTATTATCCATTATCTATATATTTTCCCGTGGAAATGTACTTGAGTCAGAGCAATATTGAACCATGGTCAGCTAAGTGGGTCATGCTTAGGGGTTTTAGCATCGGTGGCTTTGTACTGGGACTCTTCACTCTCGTTGGATCCATTGAAGGGATAGTATCTGCAAAACTAAGCTGA 1395 0.428 MKDQEGSGTDSTPLLETQYADCHHVERTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWVGGPVTIIFFACITLLSSFLLSNTYRSPDPEHGPQRSSSYLDAVNLHKGEGNSRFCGVFVNISLYGFGIAYVITAAISMRAIQISNCYYDKDDETKCGFAGPYFMLIFGAIQVVLSQTPNFHNIQWLSIVAAITSFFYAFIGMWLSAGQIRENGYAEGSIHGIPTSSGMDKVWLVAQALGDIAFSYPFSVILIEIQDTLKSPPPENQTMKKASTISVIVTTFFYLSCGCLGYAAFGNDTPGNLLTGFTSNAQHWLVDFANACIVIHLVGAYQVYSQPLFANVENWLRFKFPDSEFVNHVYFLKLPLLPAFQLNFLRLSFRTAYVASTTVIAMLFPYFNQILGVLAGIIYYPLSIYFPVEMYLSQSNIEPWSAKWVMLRGFSIGGFVLGLFTLVGSIEGIVSAKLS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0645 464 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 9 463 - -
Pvu6g0645 464 PANTHER OS05G0424000 PROTEIN-RELATED 9 463 - -
Pvu6g0645 464 Pfam Transmembrane amino acid transporter protein 27 458 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0645 Pvu-Chr6 17873023 17877116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0645 19 459 Organic Solute Cotransporters AT5G09220 47.523 4.78e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0645 K24917 - gmx:100801302 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0645 6 17873023 17877116 Pvu6g0645 6 17873023 17877116 ECH
Pvu6g0645 6 17873023 17877116 Pvu8g2919 8 58872743 58876634 PCT