Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0635 ATGATGGCTTCCCCAAACAACCACCACCCAAACACCAACACCAACACCCACCCTTCTCCTCCTCCCTTCGACATGCACTCCTTCTTCAACCCTCCGCCCCCTTCGTCAAACCCTAACCCTAACCCTAGCCCTTCATCCTCATACCCTCCGCCCTTCCCCGCCGCCGCGCCCTTTCACTTCCCGGCCTTCGACCTCCCTCTCCACCCCCACCACCGCTCCCTCTCCTTCCCCACCCAGCCCATCCCTCCGCCCTCCAACCCCAACGCCGGAGCCCGCCTCATGGCCCTCCTTAGCAACCCCTCCCCCCCGCCCCCCGACTACGCGCCTCCCTCCTCCACCCCCTCTGCTGTCCTCGCCGCTGCCACTGCCGCCGCAGCCGCCCTCACGCGACTCCCCAGCGGCAAGGTCCCCAAGGGAAGGCACCTCTCCGGGGAGCGCGTCGCCTACGACGTCGACGTCCGGCTGCCTGGCGAGGTCCAGCCGCAGCTTGAGGTTGCTCCGATCACGAAATACGGGTCGGACCCTAACCCGGTTTTGGGGAGGCAGATTGCGGTGAATAAGTCCTATATATGCTATGGGCTGAAACAGGGGAACATTAGGGTGCTTAATATCCACACTGCTGTCAGGTCTCTCCTCAGAGGCCACACTCAGAGGGTCACAGACTTGGCGTTTTTTGCTGAAGATGTTCATCTCTTGGCTAGTGTTGGCACAGATGGTCGAGTTTACGTGTGGAAGATCTCTGAAGGTCCAGATGATGAAGATAAGCTTCAAATTACAGCCAATATTGTTATTGCTATTCAAATAGTGGGGGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGTCATAAACAAGAGATTTTGATAGTTGGTATGGGAAAACATGTTTTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAACGTTTGTGGCGGAGGATCCTCCTCTGAGATGTCCTGTTGACAAGCTCATTGATGGGGTTCAGCTGGTAGGCACGCATGATGGAGAGGTGACTGATTTATCTATGTGCCAATGGATGACCAATCGATTGGTATCTGCGTCGCAGGATGGCACGATAAAGATCTGGGAAGATCGCAAGACACAACCACTTGAAGTTTTGAGACCACATGATGGACATCCAGTTTTTTCTGCTACATTTTTCACTGCTCCTCACCAGCCTGATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAGGTGAAGCTTTGGGTATCGGCAAGTGAAGAAGGTTGGCTGCTCCCAAGTGACACTGAATCATGGAAATGCACTCAGACGTTGGAGTTGAAGAGTTCAGCTCAACAATCTAGAGATGCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGGTCTTCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTACATTTAGAATATGGTCCTAATCCAGAATCAACACGCATGGATTATATAGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACAAGTGATATACTACCTCATGGTGAACATATTGTTCAGGTTTACTGTGTCCAGACACAGGCTATTCAGCAGTATGCTTTGGATTTAGCCCAGTGCTTGCCTCCACCATTGGATAATGTGGGACCAGAGAAGTCAGATTCCTGTGTTTCTGGGGATGCAGTTACTGTTGAAGGATTCCACAATTTAGACTCTTCTGCTCCCAAAATAATGTTACAAGCAGGTAGTACTGAAAGTGGACTCGTGGCCAGATACCCTTTAAGCTCTGGCCATGTTGAGGCACCTATTACATGTTCAAACACTGAAGCTAAACCTGTTACATTAGCTCCTTCTAGTAGTGATCCTGATATTGTTTGTATTCCATCTCCACCTCTTCCTTTAAGCCCAAGGTTATCTAGGAAACTCTCTGATATCAGGAGTCCACAGTCAAATTTGAGTGATCATGTTGGGGAACATCCTGTTAATGATTATTCCATAGATAGACAAATGGATACCATTCACAGAAACCTCTCTGAGACATTTAGTAGTGATTCAAAGAATGATGAGAAGAAAGTGAAACAGGATCACATTTCTAGTGTACTTAGTCCTTCTGTCATGTTTAAGCAGCCAACCCATCTAATCACCCCATCTGAGATCACAAAGGCTGGTTCCTCCTCCTCCGAGAATAATATAGTTGATAGGAAGAGTGAGGGAGAAGCAAAGATCCAGGATGTGGGTAGTGCTGAAGTGGAAGTGAAGGTGGTGGGTGAGACAAGATCTAATCAAATTGATGAATTTGGTCGGCAAGGGTCACAACAAAATCCAATTTCAGATAGTAAAGAAAAAATATTTTGCTCTCAGGCTTCAGATCTTGGTATTGAGATGGCTCGAGAAGGCTGTGTGATAGCTACTGGGGACACATTCCTTACAGAGGAACCTGGACAAATTGATTCAATGGGAGCAATGTCACCAGCTCAACCTCCTGATACTGGTGAGGATGGACTCCAAGATATGGCAAAAGATGCCCATGAAAAGGTTTCTGACTCATCTACATCTGTGGCTGTGCCACCATCTCCTGTGCCTAATGCAAAAGGGAAAAGACAGAAGGGTAAAAATTCTCAAGCATCAGGCCTACCTTCCTCATCTCCAAGTGTGTTTAATTCAACTGATTCATCCAATGAACCAAATGGAAATTCTAGCCTTCCGTCTGCTGAAAATGCTCAAATTCTGGCAATGCAGGAATCAATCAATCAGTTACTGACAATGCAAAAAGAGATGCAAAAACAAATGACAATGATGGTTGCTGTTCCAGTGACAAAAGAAGGTAGAAGGCTTGAGGCTGCCCTAGGGAGAAACATGGAAAAAGCTGTCAAGGCCAACAGTGATGCTTTATGGGCTAGAATCCAGGAGGAGAATGCAAAAAATGAAAAGTTGTTACGAGACCGTATCCAGCAAATTACAGGTCTGATTAGTAACTTTATGAATAAAGATCTACCAGCAATACTGGAGAAAACTGTAAAGAAGGAAATGGCCTCGGTTGGGCAAGCAGTAGTACGTGCAATGTCTCCTGCTGTGGAGAAAATAATATCTTCTGCTATTGTTGAATCCTTCCAGAGAGGAGTGGGTGATAAGGCAGTGAACCAACTTGATAAATCAGTTAGTTCAAAACTGGAAGCTACCGTAGCTAGGCAAATCCAGGCACAATTTCAGACAACTGGCAAACAGGTGCTTCAGGAGGCACTCAAATCCAGTTTTGAAACATCAGCTGTTCCTGCATTTGAAATGTCGTGTAAAGCCATGTTTGAGCAAGTGGATGCTACATTTCAGAAAGGCATGGCTGAACATTCAGCTGCTGTGCAGCAACGCCTTGAATCTGCACCCACTTCTTTGGCAATGACGCTAAGGGATTCCATTAATTCAGCATCATCAATTTCTCAAACTTTGAGTAGAGAAGTGCTTGAGGGCCAGAGAAAGCTAGTAGCACTCGCAGCTACAAGAACAAGCTCAGGCTCATTAAATCCTTTGCCGGTCCAGCTCAACAATGGTCCTTTACTTCATGAAAAGGTTGAGGTTCCCCTGGATCCCACACAGGAGCTAGCAAGGTTGATTTCTGAACGGAAATACGAGGAGGCTTTCATTGGAGCTCTACATAGAAGTGATGTATCCATTGTATCATGGTTATGTTCTCAGGTTGATTTACATGGACTCTTGTCAATAGTTCCTCTTCCTTTAAGTCAAGGTGTACTGCTCTCACTTCTGCAGCAACTGGCCTGTGACATTAACAACGATACAGCAAGAAAGATCGCATGGTTAACAGATGTGGCATCTGCCATAAACCCATCGGACCCATTGATTGCAATGCACACACGGCCCATCTTTGAGCAAGTATACCAGATACTCAATCATCAACGTAACTTGCCTACAATGACTGGAACTGATCTCTCTAGTATCCGTCTGTTATTGCATGTCGTCAACTCCATGCTCATGACATGTAAATGA 3990 0.4647 MMASPNNHHPNTNTNTHPSPPPFDMHSFFNPPPPSSNPNPNPSPSSSYPPPFPAAAPFHFPAFDLPLHPHHRSLSFPTQPIPPPSNPNAGARLMALLSNPSPPPPDYAPPSSTPSAVLAAATAAAAALTRLPSGKVPKGRHLSGERVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKLQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKVGNGETFVAEDPPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTQPLEVLRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSDTESWKCTQTLELKSSAQQSRDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPLDNVGPEKSDSCVSGDAVTVEGFHNLDSSAPKIMLQAGSTESGLVARYPLSSGHVEAPITCSNTEAKPVTLAPSSSDPDIVCIPSPPLPLSPRLSRKLSDIRSPQSNLSDHVGEHPVNDYSIDRQMDTIHRNLSETFSSDSKNDEKKVKQDHISSVLSPSVMFKQPTHLITPSEITKAGSSSSENNIVDRKSEGEAKIQDVGSAEVEVKVVGETRSNQIDEFGRQGSQQNPISDSKEKIFCSQASDLGIEMAREGCVIATGDTFLTEEPGQIDSMGAMSPAQPPDTGEDGLQDMAKDAHEKVSDSSTSVAVPPSPVPNAKGKRQKGKNSQASGLPSSSPSVFNSTDSSNEPNGNSSLPSAENAQILAMQESINQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRNMEKAVKANSDALWARIQEENAKNEKLLRDRIQQITGLISNFMNKDLPAILEKTVKKEMASVGQAVVRAMSPAVEKIISSAIVESFQRGVGDKAVNQLDKSVSSKLEATVARQIQAQFQTTGKQVLQEALKSSFETSAVPAFEMSCKAMFEQVDATFQKGMAEHSAAVQQRLESAPTSLAMTLRDSINSASSISQTLSREVLEGQRKLVALAATRTSSGSLNPLPVQLNNGPLLHEKVEVPLDPTQELARLISERKYEEAFIGALHRSDVSIVSWLCSQVDLHGLLSIVPLPLSQGVLLSLLQQLACDINNDTARKIAWLTDVASAINPSDPLIAMHTRPIFEQVYQILNHQRNLPTMTGTDLSSIRLLLHVVNSMLMTCK* 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0635 1329 MobiDBLite consensus disorder prediction 24 50 - -
Pvu6g0635 1329 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 22 1329 IPR045152 GO:0031087
Pvu6g0635 1329 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 22 1329 - -
Pvu6g0635 1329 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 165 477 IPR032401 -
Pvu6g0635 1329 Gene3D - 168 518 IPR015943 GO:0005515
Pvu6g0635 1329 ProSiteProfiles Trp-Asp (WD) repeats profile. 212 254 IPR001680 GO:0005515
Pvu6g0635 1329 SUPERFAMILY WD40 repeat-like 181 441 IPR036322 GO:0005515
Pvu6g0635 1329 MobiDBLite consensus disorder prediction 1 50 - -
Pvu6g0635 1329 SMART WD40_4 205 245 IPR001680 GO:0005515
Pvu6g0635 1329 SMART WD40_4 328 365 IPR001680 GO:0005515
Pvu6g0635 1329 MobiDBLite consensus disorder prediction 71 114 - -
Pvu6g0635 1329 Gene3D - 1241 1328 IPR044938 -
Pvu6g0635 1329 MobiDBLite consensus disorder prediction 1 21 - -
Pvu6g0635 1329 MobiDBLite consensus disorder prediction 808 899 - -
Pvu6g0635 1329 MobiDBLite consensus disorder prediction 864 899 - -
Pvu6g0635 1329 ProSiteProfiles Trp-Asp (WD) repeats profile. 332 374 IPR001680 GO:0005515
Pvu6g0635 1329 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 212 249 - -
Pvu6g0635 1329 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 332 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0635 Pvu-Chr6 17757437 17766179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0635 K12616 - gmx:100798228 2098.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0635 6 17757437 17766179 Pvu6g0635 6 17757437 17766179 ECH