Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0617 ATGGGTAGTAGCAGCAACGCCTCCTCCTCGGATTTCTTCTACCGCCGGCACGTGTTCCTATGCTACAAGAACCCCGCCGTGTGGCCGCCGCGCATTGAGGCTGCGGAGTTTGATCGCTTGCCCAGGTTGCTTCACGCGGCCATCAATGCAAGAAAGCCTCATATTAAGAAAGAGACCTGCTTAACAATATGTGAGGGGCATGATGGGACTGAAACATCAAATGGAGATGTATTAATCTTTCCTGACATGATCAGATATAGGAGATTAACCCATTTTGATGTTGAGACATTTGTTGAAGAAGTTCTTGTCAAGGAAAGAGAATGGCTTCCTGGAAATCCTGAATCCTTAAAAGCTTCATATGTTTTCGTGTGCTCGCATGGATCACGCGATCGTAGGTGTGGGGTTTTTGGACCTGTCTTGGTCAGTAGATTCAGGGAAGAGATAGGGTTACATGGACTTCAAGGCAAAGTGTTGATCAGCTCCTGCTCTCACATTGGGGGGAATAAGTATGCAGGAAATGTTGTTATAATTGGATCGAGCATCAATGGCGAAGTCACAGGCCACTTGTATGGATATGTTACTCCAGATGATGTGCCTTTATTGTTTCGCCAGCATATCGTAGCAGGGGAGATTTTTGACTCACTATGGAGGGGTCAAATAGGTTTATCAGAAGATGAACAGATGAAAAAGCAAGAACAAAGGCTTCAGCTAAATGGTGCAAGAAATTTAGAAGGAAGCAAAGTCGCCGGCCGCTGTCAAACAGATGGAGAGAGCTGTTGCCAGGACAATGAAGACTCTTGTTGCTGTCAGAATGATGTATTAGAGGAGGTTTCAGCTGATCATAAGAGCAAGGAGAATCTGAATGTGCTTTGTCGGATCAACAAGGGCAAAGGAGTGTCGCGCAAGTTTAGTTCCACACCAACATGGCTTGACAGCTGGGAGCAAGAGGATACTTATGCTGCTCTTGCTGTTGTCTGCGCTGCCGTGTCTGTCGCCATAGCCTACAGCTGCTACAAGCAGTGA 1023 0.4653 MGSSSNASSSDFFYRRHVFLCYKNPAVWPPRIEAAEFDRLPRLLHAAINARKPHIKKETCLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKEREWLPGNPESLKASYVFVCSHGSRDRRCGVFGPVLVSRFREEIGLHGLQGKVLISSCSHIGGNKYAGNVVIIGSSINGEVTGHLYGYVTPDDVPLLFRQHIVAGEIFDSLWRGQIGLSEDEQMKKQEQRLQLNGARNLEGSKVAGRCQTDGESCCQDNEDSCCCQNDVLEEVSADHKSKENLNVLCRINKGKGVSRKFSSTPTWLDSWEQEDTYAALAVVCAAVSVAIAYSCYKQ* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0617 340 Pfam Sucrase/ferredoxin-like 14 218 IPR009737 -
Pvu6g0617 340 SUPERFAMILY Thioredoxin-like 120 222 IPR036249 -
Pvu6g0617 340 CDD TRX_Fd_Sucrase 119 220 IPR009737 -
Pvu6g0617 340 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 13 340 IPR009737 -
Pvu6g0617 340 PANTHER SUCRASE-LIKE PROTEIN 13 340 - -
Pvu6g0617 340 Gene3D Glutaredoxin 118 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0617 Pvu-Chr6 17561815 17565230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0617 - - gmx:100788716 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0617 6 17561815 17565230 Pvu6g0617 6 17561815 17565230 ECH
Pvu6g0617 6 17561815 17565230 Pvu8g2889 8 58675166 58678320 PCT