Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0616 ATGGTAGCAAAAGTCCGGCAAAGTGCAACTGAGTCTCCTAATCCAAAACCTGAGGTTGGAGAGATTGACACCAGCCCACCTATTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCAATTATTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTATTGGCCAAGGAGACAGAACTTCATGTAGCCCAAAAACAGCTGAACAAGTTAAGGGAACAAGTAAAGAATGCTGAAACTACCAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTAAAAGGACAGTTGAGGATCTGACACAGAAGATAAAAGTTATTAGTGATTCTAGGGAGTTAGCAATTAAGACTACCGAAGCTGCAAAGAGTCAGGCAAAACTACTTACAGAAGAAAAGTATGGTATCCCTGACGGGACAGATGGTGCTTGGAAGGAAGAATTAGATTCTGCAGTAAAAAGGTATGCATCTGTCATGACAGAACTTGATGCAGCAAAGCAAGTATTGAGTAAGACTCGACAAGAGTATGATTCATCCTTGGATGCAAGAAAGTCTGCTTTCAAGCGAGCAGTAGAAGCTGGAGATGCATTGAAGGAAAACACAGAAAGAGCATCTGAGCTTTCTAAAGAAATTTTATCTGTAAAGGAGTCAATTGAGCAAGCAAAGCTTGCATCTATCTTAGCACAACAACAACAAGCAATGATTTTGGCCGAGAAAGATGTTCTAAGACAATCCTATAAAGCTACTCTGGAACAATCTGAAACAAAATTGCTTGCTTTAAAGAAGGATTTCAGTCCTGAGCTTTCCAAGAATCTTGAAATGCAGCTGGAGGAGAGAATGAGTGAAATTGGGGCTCTGCAAAAGGAAATGGAAAATAAAAGGACATCGGACTTGGACTCTGTGAAAAGCGTCACTTTGGATCTTGATGATGCCAAGGACTCACTTCAGAAAGTAGCAGATGAGGAAAGCTCTCTTAAAAGCTTAGTAGAATCTCTCAAGGTGGAACTGGAGAATGTAAAGAAAGAACATTCTGAGTTGAAGGAGAAGGAATCTGAAACTGAATCTATTGTTGGAAATCTGCATGTCAAGCTCCGCAAAAGCAAGTCTGAGCTTGAAGCCTGCATGTTAGAAGAATCTAAAGTTAGAGGTGTATCTGAGGAAATGATCTTGACGCTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCGGGAAGCAGAAGATATGAAGAAAAAAACAGCAGATTTGAAGAAGGAAGCTGAAGTTACCGTACTTGCATTAGCAGAAGCAGAGAAAAAGCTTAAAGTGGCACTGGAAGAAGCAGAAGCAGCAAAAGCAGCCGAGAAAAGTGCTCTTGACCAGATTACAGTTTTAACAGAAAGAACTACTGCTGCTCGTGCATCCACATCTGAATCTGGGGCTGTGATTACAATCTCAAAAGAGGAGTTTGACTCCTTAAGCCATAAAGTTGAGGAGTCTGACAAATTAGCAGACATGAAAGTGGCTGCTGCCAAGGCACAGGTGGAAGCTGTGAAGGCTAGTGAAAATGAGGCTCTCAAAAGGTTAGAGACAACTCAGAAGGAGATTGAGGATATAAAGGCTGCAACACAAGAGGCTCTGAAAAAGGCTGAAATGGCTGAAGCAGCAAAAAGGGCAGTGGAGAATGAGCTCCGAAGATGGCGTGAGAGGGACCAGAAAAAGGCTGCAGAAGCCGCATCCCGAATTTTGGCTGAAACACAGGTGTCAACAGAATCATCTCCTCAGCACTACAGGATTCAAAAGCAGAATCCTCCTCATACAACAGTGGAGGTGAGGAAGTTTGAAAAGGAGAAGGTTCCAGTTTCAAAAAAGGCCCTCTTGCCTAATATTAGTGGCATCTTCCAAAGGAAGAAAAATCAGGTTGAGGGTGGCTCTCCTTCTTATCTGCCTGGTGAGAACCCTCTATGA 1962 0.4256 MVAKVRQSATESPNPKPEVGEIDTSPPIQSVKDAVSLFGEGAFSGEKPIIKKAKPYSAERVLAKETELHVAQKQLNKLREQVKNAETTKAQALVELERAKRTVEDLTQKIKVISDSRELAIKTTEAAKSQAKLLTEEKYGIPDGTDGAWKEELDSAVKRYASVMTELDAAKQVLSKTRQEYDSSLDARKSAFKRAVEAGDALKENTERASELSKEILSVKESIEQAKLASILAQQQQAMILAEKDVLRQSYKATLEQSETKLLALKKDFSPELSKNLEMQLEERMSEIGALQKEMENKRTSDLDSVKSVTLDLDDAKDSLQKVADEESSLKSLVESLKVELENVKKEHSELKEKESETESIVGNLHVKLRKSKSELEACMLEESKVRGVSEEMILTLSQLTSETENARREAEDMKKKTADLKKEAEVTVLALAEAEKKLKVALEEAEAAKAAEKSALDQITVLTERTTAARASTSESGAVITISKEEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENEALKRLETTQKEIEDIKAATQEALKKAEMAEAAKRAVENELRRWRERDQKKAAEAASRILAETQVSTESSPQHYRIQKQNPPHTTVEVRKFEKEKVPVSKKALLPNISGIFQRKKNQVEGGSPSYLPGENPL* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0616 653 Coils Coil 274 294 - -
Pvu6g0616 653 MobiDBLite consensus disorder prediction 1 30 - -
Pvu6g0616 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Pvu6g0616 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 630 - -
Pvu6g0616 653 Coils Coil 61 116 - -
Pvu6g0616 653 Coils Coil 510 568 - -
Pvu6g0616 653 MobiDBLite consensus disorder prediction 584 605 - -
Pvu6g0616 653 Coils Coil 397 424 - -
Pvu6g0616 653 Coils Coil 248 268 - -
Pvu6g0616 653 Coils Coil 327 361 - -
Pvu6g0616 653 MobiDBLite consensus disorder prediction 634 653 - -
Pvu6g0616 653 Coils Coil 432 452 - -
Pvu6g0616 653 Coils Coil 209 229 - -
Pvu6g0616 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 630 - -
Pvu6g0616 653 MobiDBLite consensus disorder prediction 584 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0616 Pvu-Chr6 17549920 17555283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0616 - - gmx:100794569 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0616 6 17549920 17555283 Pvu8g2888 8 58670486 58673760 PCT