Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0604 ATGTCTCTTGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATACTTCGACCCGTCTCACGTTTTGCGAGAGAAAATAGATCAACTTGCTATAATGATAAAAAAGAGTAAGCATCTAGTGGTATTTACAGGTGCAGGAATATCAACCTCATGTGGTATACCGGATTTTCGAGGTCCCAAGGGAATATGGACGCTTCAGCGTGAAGGTAAAGCCTTGCCAGAAGCATCACTGCCATTTCATCGTGCAGCACCAAGTTTGACACACATGGCTTTGGTTGAACTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCCGGAATACCAAGGGAGAAATTAGCTGAGTTGCATGGGAACTCCTTCATGGAGACATGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAGACTATTGGTTTAAAGGAGACATCAAGGCGTTGTACAGTTGCCAAATGTGGGACAAGACTTAAGGATACTGTCCTTGACTGGGAGGATGCATTGCCTCCAAAGGAGATGAATCCTGCTGAGAAGCACTGTAAACAGGCAGATATAGTGTTATGCTTGGGTACAAGTTTACAAATAACTCCAGCGTGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGCAGATAAGGTAATTGCGGGTGTCATGGACCATCTTAATATGCAGATTCCACCATTCGTCAGGATTGATCTTTTCCAGATTGTTCTAGTGCAAGCTTTGAGCAATGATAAAAGATATGTGAACTGGACTCTCCAGATTGCCAGTGCTCATGGACAAAGAGCGGCATTGCCTTTCATCGAGTCTGTTGAGGTCTCCTTCTTGGACAGGGAAGATTACAAAGCTGCCATTCTAGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTCAGTGATGGCTGTGGTTGCCCATCCCTTGAAATTGATGTCCCGGTTGATTTTAAGGTTTCAACTGACTGTTTTGACTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAAGCAGTTCTTGAATCAAGATGTGGTCAGAATGGTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAACATGTAAAGCAGCCCTTGATTCTCTAAGTAATGGTGATCACAAAAAAAGAAAAGCTAGTGTGACTGGTACAGGATCATCTAGGAAGCGTTCAAAAGGGTCCTCCAAGTGTAAATCCTGA 1413 0.4275 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSLTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGEEYFRDFEVETIGLKETSRRCTVAKCGTRLKDTVLDWEDALPPKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFADKVIAGVMDHLNMQIPPFVRIDLFQIVLVQALSNDKRYVNWTLQIASAHGQRAALPFIESVEVSFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCPSLEIDVPVDFKVSTDCFDFDKDYIFQKLRDKAVLESRCGQNGVIERKTILTPRSDVTTYAIVTNVVQYSKTCKAALDSLSNGDHKKRKASVTGTGSSRKRSKGSSKCKS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0604 470 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 1 466 - -
Pvu6g0604 470 MobiDBLite consensus disorder prediction 442 470 - -
Pvu6g0604 470 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 1 466 - -
Pvu6g0604 470 Pfam Sir2 family 86 216 IPR003000 GO:0070403
Pvu6g0604 470 Pfam Sir2 family 52 75 IPR003000 GO:0070403
Pvu6g0604 470 Gene3D - 135 184 - -
Pvu6g0604 470 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 292 IPR029035 -
Pvu6g0604 470 ProSiteProfiles Sirtuin catalytic domain profile. 35 269 IPR026590 -
Pvu6g0604 470 Gene3D - 36 262 - -
Pvu6g0604 470 CDD SIRT7 45 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0604 Pvu-Chr6 17461309 17472998 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0604 K11416 - gmx:100803586 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0604 6 17461309 17472998 Pvu6g0604 6 17461309 17472998 ECH