Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0557 ATGGATACACTGAACACGATCTCAACAGCACTGAACTTGGTCGATTCCAAGAAAGAGAATCTGAAGAAAGCCTTCGATGATCTCCAATCCCTTCTCTCTCCTCTTCCTCTCGCATGGCCAGACCTCGATTCTCACTTCACCTCGCTCCACCACTCTCTCTCCCAACGCCTCCACCTCCTCCAGTCCCAAACCCTAACCCCAACCCCAATTCCCGACCCACCTGCCCAAACCCCTAATGAAGCGATTCTTTCATCAAACCCTAACGACCCATCATCGAATCATGCCGAATCTTCACCTGGGGTGTCGCTCCAAAACGACTCCGTCCCTGGCTCGGTTACGCCTAGAAAAGAAATGATCGTTCTTTGCGAGAAAATGGACGGTGTGGGGTTGAGGAATTACGTCAATGACCATTTTTTGGACAGGGCCAGAGTTCAGGGGGAGCTTTCCGGTGCGTTTCAACATGCGCCGGACGCGGGTGTGATGGTTCTGGAAGCGTTGGAGGGGTTTCATGGAGATGGTAGTGGATTGAAGGAATGGGAATTGAGGAAAATGAGGAAGAGTTGTGTTGTGTTGGTGAAGCAATTCAGGGTTGCTGCTCTAAGTGTGAGTGCTGAGGCTAGGGTGAGAGCTGTGAAGTTGGCCCAGGCATGGAAAGAGAAGTTTGTGGGTGATGATAACAATGCGTTTGGTGCTTTGGGGCTTTTGCATTTGATTGCTGCATTTGGTTTGGTTTCTGAATTCAGCTTGGATGAGCTTGTTGACTTTTCGGTCGTGGCCCCCACCAATGAGGAGTTCCCAGAGCTCTGCCGGGCGGTCGGGTTGACAGAGAAAGTTCCTGATATCGTTCAGAAACTTATAGATAAGGACAAACATATCCCAGCTGTCAAGTATATTCTTGAGTTCAATCTTGCTGATAAGATTCCACCTGTTCCTGTTTTGAAAGCTGGTGTGGATGAAGCTAAGAAACTTGCTAAAAAACTTTCCGATGAAGGACATTCATCTAGTGAGAGTACTGCTAGAGAAATTCATACACTGAAATTGGTGATCAAGATTATTGAGAATTATAAGCTTGAATCTGAACACCTATGCACTAGCCTTGAGCAGCGTATCGAGCAATTAAAGAGGCAGAAGACCAATAATAAACGAGCTACTCCAGCCCCTCCTGCAAAGCCTCATCATAAACAGCAGCAACAACAGCAAAAGAGGAATATGCAGAAGCAGCAGCATACTGGGAGCACACATCCTCGAGCATTTGCTCCAGTTGTTCCTGCAGCTGTCCTCAAGAATGTCAATTCGGCAATGCACCACTACCAGCAACCTCGTGTCCATCCATCAGGTTTGTTTCCAGAGCATCCAAATCCCTATACAAGCTCGCCAGCCATGCCAATTGGCATGATGGCTTCTACTGGAAAATTTCTTCCTTATGCAGGTCCTTCAGCTGGACCTTATGGCCATGATGGTATCCCAATGGGTTCGCGTGGCAACCCCAATCTAAGTGGTTCTCATCTAAGCTCATCGGAGCCACATGTGCCAACTGGTGGTTATTATGATAGAACCTCTACTTTTGGTGGTATTGGTCTGCAACATTATTACCAAGCATCTTATTACCCTCAATAG 1617 0.475 MDTLNTISTALNLVDSKKENLKKAFDDLQSLLSPLPLAWPDLDSHFTSLHHSLSQRLHLLQSQTLTPTPIPDPPAQTPNEAILSSNPNDPSSNHAESSPGVSLQNDSVPGSVTPRKEMIVLCEKMDGVGLRNYVNDHFLDRARVQGELSGAFQHAPDAGVMVLEALEGFHGDGSGLKEWELRKMRKSCVVLVKQFRVAALSVSAEARVRAVKLAQAWKEKFVGDDNNAFGALGLLHLIAAFGLVSEFSLDELVDFSVVAPTNEEFPELCRAVGLTEKVPDIVQKLIDKDKHIPAVKYILEFNLADKIPPVPVLKAGVDEAKKLAKKLSDEGHSSSESTAREIHTLKLVIKIIENYKLESEHLCTSLEQRIEQLKRQKTNNKRATPAPPAKPHHKQQQQQQKRNMQKQQHTGSTHPRAFAPVVPAAVLKNVNSAMHHYQQPRVHPSGLFPEHPNPYTSSPAMPIGMMASTGKFLPYAGPSAGPYGHDGIPMGSRGNPNLSGSHLSSSEPHVPTGGYYDRTSTFGGIGLQHYYQASYYPQ* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0557 538 Coils Coil 356 383 - -
Pvu6g0557 538 MobiDBLite consensus disorder prediction 391 414 - -
Pvu6g0557 538 MobiDBLite consensus disorder prediction 64 111 - -
Pvu6g0557 538 MobiDBLite consensus disorder prediction 78 111 - -
Pvu6g0557 538 MobiDBLite consensus disorder prediction 493 515 - -
Pvu6g0557 538 MobiDBLite consensus disorder prediction 494 508 - -
Pvu6g0557 538 MobiDBLite consensus disorder prediction 375 418 - -
Pvu6g0557 538 PANTHER FRIGIDA-LIKE PROTEIN 1 537 - -
Pvu6g0557 538 Pfam Frigida-like protein 112 384 IPR012474 -
Pvu6g0557 538 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 1 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0557 Pvu-Chr6 16835152 16839132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0557 - - gmx:102669439 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0557 6 16835152 16839132 Pvu6g0557 6 16835152 16839132 ECH
Pvu6g0557 6 16835152 16839132 Pvu8g2840 8 58427743 58430851 PCT