Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0554 ATGGCATCAAACCAGATCCTGAGAGAACTACAATGGGCTCAGCAAGCCATCAAATCAGAGGGCCTAAATCTGCACAGTATTTCCTTCTACCTCTCCCAACCAACTTCAGGTTGTTATCAAGAAACAGAAAACTCCATAAGCATAAACATTTCCAAGGAAGAGCTTCCATTCTTTTCCCCCCTCTTGACAACTCTAGCAGCACCAGGGAAACACAACTCCTCCTTGAGAAACTTGGAGTTCCACAAAGTTGAATGGGACTCAAAACAGGTAAGACATCTTGGCACTTTGCTGGGGAATAACCAAAATGTACAACATTTGGTTTTTAGAAGAAACAGGTTCAATGGAAAAAGCCTCTCAGACCTTTCTGACATTCTGAAGGCAAATAAAGGGATCAAAGAGATCATGCTTTCAGAATCAGGCATAGGGTCTGTTGGAGCGGGACTCATTGCTTCTGCTCTTAGGGTGAATGACAGTTTGGAGGAGCTGCAGATATGGGAAGACTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCGAAGATGATTGAAGTTAACTCAACACTAAAACTGTTGACAATTTTTGACTCAAATGCCATCACAGCTACACCTCTTATATCTGCAGTTTTGGCAAGGAACAGAAGAATGGAAGTTCATGTTTGGAGTGGGGAGAATAGGGAAAAGAGTTCCAAGGTGGTTGAGTTTGAACCTGAGAACAGCACGCTTAGAATTTACAAGCTTAACCTCTCAGGGACTTGTAGAGTTACCTGCTCTTTAGGCATGAACTTCACTGTGAAGTCCCTTGACATGACCGGAGTAAGGCTAAAATCCCGGTGTGCCAAGGAATTTAGGTTGGTTTTGGAACAAAACCAGAGCCTCAAAGAGGTAAACTTGTCTAGAACATGCCTTAAAGACAAGGGCATTGTGTATATTGCAGCAGGCCTCTTCAAGAACAGAACCCTGCAAACCTTACACCTGAATGGAAATTGGTTCAGTGGAATGGGTGTGGAGCATCTATTATGCCCTTTGAGTAGATTTTCAGCACTTCAAAGGCAAGCTAACATTACTTTGACATGTATTACTTTTGGAGGAGAAAGAACAAGAATAGGAAGGGATGGTCTAGCTGCTGTTATACAGTTTCTTATAACAAATGAAACAGTGAGGCAGTTGAGAATTCACGATGATGAGAGTTTGAGATCAGATGACTTTGTTAAAATCTTCAGGAGTTTGGAGAAGAATGCTAGCTTGAAATGCTTGTCTCTTCAAGGATGCAAACGTGTGGAGGGAGAGATATTGCTGAAGACAATTATGGAGACACTGCAGATAAATCCTTGGATTGAAGACATTGATCTCTCCAGAACACCTTTACAAAACTCTGGAAGGACTCAGCGGATTTATCAGAGATTAGGCCAGAATGAGAAGACTGAACCAGATATGGATTCTGTCAAGGACATGCCTCTCGCAGAACCCAAGAGTTGCAGAGTTTTCTTTTGTGGCCAAGAATGTGCAGGCAAAACCGCACTTTGTCATTCAATATCACAAAATTTCTCTGCTTCGGCGCTTCCCTACTTGGATCAAGTCAGAACAATAGTGAACCCAGTGGAGCTGGCTGTCAAATCAGTAGGAATGAAGATAAAAACTTTCAAGGATGAGGATACAACGATTTCAATATGGAATCTTGCTGGTCATCACGAGTTTATATCTCTCCATGATCTCATGTTCCCAGGGCATGGGAGTGCATCATTTTTCATCATCATATCAAGTTTATTCAGGAAACCAAGTAACAAAGAACCAAAGAGCTCAACAGAAATTGAAGATGACCTGCAGTATTGGCTCAGGTTCATAGTTTCCAACTCTAAAAGAGCAATACAACAATGCATGCTACCAAGTGTTGCTATTGTTCTCACACACTCTGACAAAATCAACCAACCATCACAAAATTTGCAGAGCACAGTAGAGTCAATTCAGAGACTCAGAGACAAGTTTCAAGGCTTTGTTGACTTTTACCCAACTGTATTCACAGTTGATGCAAGATCATCAGCATCAGTTAGTAAACTCACTCATCATATCCGAACGACAAGCAAGACAATTCTCCAAAGAGTGCCTCGGGTTTATCAACTTTGCAATGATCTGATACAGATTTTATCAGACTGGAGATCTGAGAACTACAACAAGCCAGCCATGAAGTGGAAGGAATTTGGTGAGCTATGCCAATTGAAAGTTCCACCTTTGAGAATTCGATCAAGACATGACAACAAAGAGAAGGTAGAAATGAAGAGAAGAGCTATTGCTACCTGTCTTCATCACATTGGAGAAGTGATTTATTTTGATGAGTTAGATTTTCTAATTTTAGATTTTGAGTGGTTCTGTGGTGAAGTCCTTGGTCAGCTCATAAAGTTGAATGTTAGGAAGCAGCACTCCTCTGAAAACAATGGATTTATTAGCAGGAAGGAATTAGAAAAAATCTTAAGAGGAAGTTTGCAGAGCCCTATTCCTGGTATGGGTTCAAAGGTGTTTGAGAATTTAGACGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTTTGTTATGAGGAAGATCCCTCAGATCCAAATTCTCTGCTATTGATTCCTTCCATTCTTGAAGAAGGGAGAGGCAAGCCTCAGAGGTGGCAGCTAAGCATGCCAGACTGCGTTTACGCAGGACGTCATCTTGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCAGGTTTCTTCCCTCGTTTACAGGAAAGAGTGCACCTTCACAATAGAATAAAGGCTGTCAAGGATCAGCATGGTGCAACTTACAGTCTTGAGAAGTACCTTATTTCAATCAGCATTAATGGAATCTACATAAGAGTAGAACTTGGGGGACAGTTGGGTTACTATATTGATGTCCTAGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCATCAAATTGTAATCCCCGCAATCCAAAGTGTTTGCCATGGGATCACCTTGACTGAGAATGTGTTAAGACCTGAATGTGTGAGAAAACTGACACCTCCTAGATACAGAAAAACTCAATTTGCTTCTCTGCAGCAACTGAAAGAAGCACTACTTTCACTTCCAGCAGAAAGCATGTATGATTATCAACACACATGGAGTCCAGTCCTAGACTCTGGTAGGCCTATTCTCCAAGATGGATTTGATTTTGCAAGAGACCTTTTATCAGATGATGACTTCCGGGAAGTGTTGCATCGAAGGTATAACGACCTTTACAGTCTTGCACAAGAACTGCAAGTTCCTCCTGAAAATAACCCTGAAGGGCAAGGTCAATCTATAACCTTAAGAGATGAAGCTGCAAGGGTTGAACCAACCTTTGGTGGCATTGCAAAAGGGGTTGAAGAAGTTTTGCAAAGACTCAAGATTATTGAGCAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTGAGATATTATGAACATAGACTTCTCCTTGAGCTTCATCGCAAAGTGAACCACCTTGCAACCTTCAATGTCCAGGTTGAGGAGAGGAAAGTCCCCAACATGATATATTTTGTTAGGACAGAAAACTACACAAGGAGACTGGTCACCACCATGCTTTCTGGCATGAATGCTCTTCGGCTTCACATGTTATGCGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGATGGGATGTGAAATCATGCAAGTTGATAATGCTGCTGTGAAGTCTTTGGCTCCATACATGAAGAAGTTCATGACATTGGTAACTTTAGCTCTTAAAATAGGAGCTCACCTTGCTGCTGGAATGGGGCAAATGATACCTGACTTGAGTAAGGAGGTGGCTCACTTGGCTGGCTCTTCAGTTCTCTGTGGTGCAGCTGGGGCAAGTGCAGCTGGCGTTTTAGGTGCTGCTGCTATGGGTCGTAGAAACAGGTCCATGGAAGGTTCAAGGGACATTCAACAAGACTTAAGAGCAGCACAGCAATGGGTGGTTGATTTCTTGAGGGAGAGGAATTGTTCCTCAGGGAAGGATATTGCAGAAAAGTTTGGACTGTGGCGAGTCAGGTACAGGGACAACGGTCAAATAGCATGGATCTGCAGGAGGCACATCTATGCAAGATCTGCAGAGATAAATGAAGTACCAATTTGA 4140 0.4227 MASNQILRELQWAQQAIKSEGLNLHSISFYLSQPTSGCYQETENSISINISKEELPFFSPLLTTLAAPGKHNSSLRNLEFHKVEWDSKQVRHLGTLLGNNQNVQHLVFRRNRFNGKSLSDLSDILKANKGIKEIMLSESGIGSVGAGLIASALRVNDSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVLARNRRMEVHVWSGENREKSSKVVEFEPENSTLRIYKLNLSGTCRVTCSLGMNFTVKSLDMTGVRLKSRCAKEFRLVLEQNQSLKEVNLSRTCLKDKGIVYIAAGLFKNRTLQTLHLNGNWFSGMGVEHLLCPLSRFSALQRQANITLTCITFGGERTRIGRDGLAAVIQFLITNETVRQLRIHDDESLRSDDFVKIFRSLEKNASLKCLSLQGCKRVEGEILLKTIMETLQINPWIEDIDLSRTPLQNSGRTQRIYQRLGQNEKTEPDMDSVKDMPLAEPKSCRVFFCGQECAGKTALCHSISQNFSASALPYLDQVRTIVNPVELAVKSVGMKIKTFKDEDTTISIWNLAGHHEFISLHDLMFPGHGSASFFIIISSLFRKPSNKEPKSSTEIEDDLQYWLRFIVSNSKRAIQQCMLPSVAIVLTHSDKINQPSQNLQSTVESIQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRTTSKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQLKVPPLRIRSRHDNKEKVEMKRRAIATCLHHIGEVIYFDELDFLILDFEWFCGEVLGQLIKLNVRKQHSSENNGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEEDPSDPNSLLLIPSILEEGRGKPQRWQLSMPDCVYAGRHLECDDSSHMFLTPGFFPRLQERVHLHNRIKAVKDQHGATYSLEKYLISISINGIYIRVELGGQLGYYIDVLACSTKNLTETLRVIHQIVIPAIQSVCHGITLTENVLRPECVRKLTPPRYRKTQFASLQQLKEALLSLPAESMYDYQHTWSPVLDSGRPILQDGFDFARDLLSDDDFREVLHRRYNDLYSLAQELQVPPENNPEGQGQSITLRDEAARVEPTFGGIAKGVEEVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNHLATFNVQVEERKVPNMIYFVRTENYTRRLVTTMLSGMNALRLHMLCEFRGQMHVVEDQMGCEIMQVDNAAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSVLCGAAGASAAGVLGAAAMGRRNRSMEGSRDIQQDLRAAQQWVVDFLRERNCSSGKDIAEKFGLWRVRYRDNGQIAWICRRHIYARSAEINEVPI* 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0554 1379 Pfam C-terminal of Roc, COR, domain 755 922 IPR032171 -
Pvu6g0554 1379 Gene3D Ribonuclease Inhibitor 344 478 IPR032675 -
Pvu6g0554 1379 Gene3D Ribonuclease Inhibitor 57 218 IPR032675 -
Pvu6g0554 1379 Gene3D Ribonuclease Inhibitor 228 339 IPR032675 -
Pvu6g0554 1379 SMART LRR_RI_2 316 343 - -
Pvu6g0554 1379 SMART LRR_RI_2 288 315 - -
Pvu6g0554 1379 SMART LRR_RI_2 128 155 - -
Pvu6g0554 1379 SMART LRR_RI_2 156 183 - -
Pvu6g0554 1379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 683 IPR027417 -
Pvu6g0554 1379 Gene3D - 490 694 IPR027417 -
Pvu6g0554 1379 Coils Coil 1126 1153 - -
Pvu6g0554 1379 Pfam Leucine Rich repeat 315 337 IPR001611 GO:0005515
Pvu6g0554 1379 Pfam Leucine Rich repeat 287 310 IPR001611 GO:0005515
Pvu6g0554 1379 SUPERFAMILY RNI-like 22 468 - -
Pvu6g0554 1379 PANTHER PROTEIN TORNADO 1 1 1368 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0554 - - gmx:100817598 2476.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0554 6 16772648 16777587 Pvu6g0554 6 16772648 16777587 ECH