Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0506 ATGGCGACGGCAAATGGTGGTCAAAATCCCCTTCTTGATGAAATCAGCTGCGGTTCCTTGTTACATAAGCTTCAGGAAATATGGGATGAGGTTGGTGAGATTGATGAGGAGCGAGACAAGATGCTCCTTCAGATAGAGGAAGAGTGTTTGGATGTGTACAAAAGAAAGGTTGAGCTGGCTGCTAAGTCAAGGGCACAACTACTTCAATCCTTGTCTGATGCTAAGCTTAAGCTGTCTAGTCTTTTATTGGCTCTTGGTGAAAACAGTTTCACGGGAATGCCTGACAAGACTTCAGGTACTATTAAGGAACAACTTGCAGCCATAGCACCAATACTTGAACAGCTTTGGCAACAAAAAGAGGAAAGAGTAAAGGAGTTTTCAGATGTACAGTTACAGATCGAACAAATATGTGGAGAGATAACTGGGGACTTGAACCCTGATCAGACTGGATTAGGATCATTTACAGTTGATGAGTCTGACCTGTCCTTGAAGAAGTTGGATGAATATCAATCCCAACTCCAAGAACTTCAAAGGGAAAAGAGTGAGAGGTTACACAAAGTTCTTGAATATGTGAGTACAGTGCATGATATATGTGCTGTCCTTGGTATGGAGTTCTTTAGTATTGTGACTGAAGTTCATCCAAGCTTAAATGATGCTGTTGGTGTTCATTCCAAAAGCATAAGCAATGGCACACTAGCTAAACTGGCTAAGACAGTCTCTGCACTGAAAGAAGATAAAAGGCAGCGGCTACACAAGCTTCAAGAATTAGCTTCTCAGTTGATTGATCTGTGGAATCTAATGGATACCCCTACAGAGGAAAGGAGACTATTTGACCACGTTACTTGTAATATCTCAGCTTCTGTAGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATTTGATTGAGCAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAAGATGAAAGAAATTGCTTTCAAGAAGCAAGATGAGCTTGAAGATATATATGCCCGTGCTCATGTAGAAATAAACCCTGAAGCTGCTCGAGGGAATATTTTATCATTGATTGACTCTGGAAACATTGAACCATCTGAATTACTGACTGACATGGACAAACAGATAGCTGCAGCAAAAGAAGAAGCTTTAAGCCGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCTGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATAGGGATGAAAACAGGTATAATGCAAGTAGAGGTGCACACATAAACCTCAAACGTGCAGAGAAAGCTCGAATACTGGTCAGCAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGCACTTGGGAAGAGGCACACAACATGTCATTCACATATGATGGTGTTCCTCTCCTTGCTATGTTGGATGAATATGCCATGCTCAGGCATGAACGGCAAGAGGAAAAACGAAGGATGAGGGACCAGAAAAAGTATTATGAGCAGCAAACCACAGATCAGGACCCTGTATTTAGTTCGAGACCTAGCCCTGCAAGGCCACTTGGCAACAAGAAGGTAGTTGGCCCTCGTCCGAACGGAGGACCAAACGGTACTCCAAATAGACGGCTATCTCTTAATGCTCATCAAAATGGAAGCAGGTCCACAACCAAGGATGGAAAAAGGGATAATACTAGACCAGTTGCTCCTATTAACTATGTATCAATATCAAAAGAAGATGCTGCTTCCCTTGTTTCTGGTACTGAACCAGTTCCAACATCACCCTAG 1764 0.4246 MATANGGQNPLLDEISCGSLLHKLQEIWDEVGEIDEERDKMLLQIEEECLDVYKRKVELAAKSRAQLLQSLSDAKLKLSSLLLALGENSFTGMPDKTSGTIKEQLAAIAPILEQLWQQKEERVKEFSDVQLQIEQICGEITGDLNPDQTGLGSFTVDESDLSLKKLDEYQSQLQELQREKSERLHKVLEYVSTVHDICAVLGMEFFSIVTEVHPSLNDAVGVHSKSISNGTLAKLAKTVSALKEDKRQRLHKLQELASQLIDLWNLMDTPTEERRLFDHVTCNISASVDEVTVPGALALDLIEQAEVEVERLDQLKASKMKEIAFKKQDELEDIYARAHVEINPEAARGNILSLIDSGNIEPSELLTDMDKQIAAAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHINLKRAEKARILVSKIPALVDTLVAKTRTWEEAHNMSFTYDGVPLLAMLDEYAMLRHERQEEKRRMRDQKKYYEQQTTDQDPVFSSRPSPARPLGNKKVVGPRPNGGPNGTPNRRLSLNAHQNGSRSTTKDGKRDNTRPVAPINYVSISKEDAASLVSGTEPVPTSP* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0506 587 Coils Coil 159 186 - -
Pvu6g0506 587 MobiDBLite consensus disorder prediction 480 587 - -
Pvu6g0506 587 MobiDBLite consensus disorder prediction 571 587 - -
Pvu6g0506 587 MobiDBLite consensus disorder prediction 530 546 - -
Pvu6g0506 587 MobiDBLite consensus disorder prediction 480 495 - -
Pvu6g0506 587 Gene3D - 373 506 - -
Pvu6g0506 587 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 587 IPR007145 GO:0000226|GO:0008017
Pvu6g0506 587 Coils Coil 243 263 - -
Pvu6g0506 587 Pfam Microtubule associated protein (MAP65/ASE1 family) 19 509 - -
Pvu6g0506 587 PANTHER MICROTUBULE-ASSOCIATED PROTEIN, MAP65/ASE1/PRC1-RELATED 5 587 - -
Pvu6g0506 587 Coils Coil 302 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0506 Pvu-Chr6 16327954 16332888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0506 14 548 EF-hand Containing Proteins AT5G62250 42.804 7.34e-124 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0506 K16732 - qsu:112012954 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0506 6 16327954 16332888 Pvu6g0506 6 16327954 16332888 ECH
Pvu6g0506 6 16327954 16332888 Pvu8g2814 8 58214825 58219891 PCT