Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0478 ATGGACAACAACAGAATTGTGATGGCAAATTTCCTGCTCTTTCTGTCTTTCTTCATCTTCACCTCAGAACTCTTGGAAGCTCAAAAGGCTCCAGCAGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAATAATTATTTGAGTTTCTCCATTGAAAAGGCCATTCTTCCTCACTATGGCATTGATTTTCCAACCAAGAAACCAGCAGGGAGATTTACAAATGGCAAGAATGCTGCAGATTTAATTGCTGAAAAATTGGGTCTACCCACTTCACCACCTTATCTCTCCCTTCTATCTAAAGTCCACAATCCCAACAAAAACATATCTTTTTTGGGTGGTGTGAACTTTGCCTCTGGAGGTGCTGGAATATTTAATGCCTCAGATAAAGGTTTTATGCAATCAATTCCTTTGCAAAAACAAGTGGACTACTACTCACAAGTGCATGAAAAACTTACACAACAAATAGGAGCATCTACTCTTGAGAAACACCTCTCAAAGTCTATCTTCATTGTGGTGATTGGTGGCAATGATGTCTTTGGTTACTTTGACTCAGAGGATCTTCAAAAGAAAAACACTCCTCAGCAGTATGCAGATTCCATGGCTTCCATATTAAAAGTGCAACTACAGAGATTATACAACAATGGTGCAAAGAAATTTGGGATTGCTGGTCTTGGTGCAATTGGGTGCTGCCCTGCATACAGGCTTAAGAACAAAACAGAATGTTTTTCTGCAGCCAATGACTTGTCGGCAAAGTACAATGAAGCTCTTCAATCCATCTTAAAGCAATGGAAATTGGAGAAAAAAGACATGAGTTATTCCTATTTTGATACTTATGCTGCAAACCAAGACCTCGTTCACAATTCAACTTCTCATGGATTTAGTAATGTAAAAGATGCTTGTTGTGGACTTGGTGAATTGAATGCCCAAATTCCATGCCTACCAATTTCAAGCATTTGTTCAAACAGACAAGACCATGTTTTCTGGGATGCATTCCACCCTACAGAGGCAGCTGCTCGCATCTTTGTGGATGAAATGTTCAATGGACCTTCAAAATTCATATCTCCTATTAATATAGAACAACTACTAGTCATCTGA 1101 0.3906 MDNNRIVMANFLLFLSFFIFTSELLEAQKAPAVYVFGDSLVDVGNNNYLSFSIEKAILPHYGIDFPTKKPAGRFTNGKNAADLIAEKLGLPTSPPYLSLLSKVHNPNKNISFLGGVNFASGGAGIFNASDKGFMQSIPLQKQVDYYSQVHEKLTQQIGASTLEKHLSKSIFIVVIGGNDVFGYFDSEDLQKKNTPQQYADSMASILKVQLQRLYNNGAKKFGIAGLGAIGCCPAYRLKNKTECFSAANDLSAKYNEALQSILKQWKLEKKDMSYSYFDTYAANQDLVHNSTSHGFSNVKDACCGLGELNAQIPCLPISSICSNRQDHVFWDAFHPTEAAARIFVDEMFNGPSKFISPINIEQLLVI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0478 366 Gene3D SGNH hydrolase 20 352 IPR036514 -
Pvu6g0478 366 SUPERFAMILY SGNH hydrolase 31 348 - -
Pvu6g0478 366 Pfam GDSL-like Lipase/Acylhydrolase 33 345 IPR001087 GO:0016788
Pvu6g0478 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 364 - -
Pvu6g0478 366 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 8 364 - -
Pvu6g0478 366 CDD SGNH_plant_lipase_like 31 351 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0478 Pvu-Chr6 15949833 15952823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0478 30 364 Acyl Lipid Metabolism Gene Families AT4G10950 33.724 7.55e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0478 - - gmx:100790145 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0478 6 15949833 15952823 Pvu6g0478 6 15949833 15952823 ECH
Pvu6g0478 6 15949833 15952823 Pvu8g2776 8 57924329 57929065 PCT