Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0453 ATGGCGTCGTTTTGCGCCGCAAGGACTTTCCACATTCCGGCGATGAACGGCGGCGCTTTTCGCCGGCAGGCATCCTGGGCCGCCGGAATTGGTGGAGCCACGGTGGCCGGCGCCGCACTATTGCGTTCGTGTTCGTCTAAGCGCTCTCTGCCATTCGCGTGCAGGAGCATCTCTAACGATACCCGAGTAAAGGAAGCTGTTCAGACTGAAAAGGCCCCAGCAGCATTGGGGCCATATTCTCAAGCAATAAAAGCCAACAACCTTCTGTTTGTGTCGGGTGTTCTTGGCCTTGTTCCCGAGACTGGAAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGGTTCTCAAAAATATGGGGGAGATACTAAAATCTGGGGGTGCTGGCTACTCATCAGTTGTCAAGACAACAATATTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAATACTTCCCTTCACCTGCCCCAGCTCGAGCTACCTATCAAGTTGCTGCCTTGCCAATGGATGCCAAGATTGAAATTGAGTGCATAGCAGCACTTTGA 564 0.5053 MASFCAARTFHIPAMNGGAFRRQASWAAGIGGATVAGAALLRSCSSKRSLPFACRSISNDTRVKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLVPETGKFISDNVEDQTEQVLKNMGEILKSGGAGYSSVVKTTILLADLKDFKKVNEIYAKYFPSPAPARATYQVAALPMDAKIEIECIAAL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0453 187 Pfam Endoribonuclease L-PSP 70 186 IPR006175 -
Pvu6g0453 187 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 64 186 IPR006056 -
Pvu6g0453 187 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 1 187 IPR006175 -
Pvu6g0453 187 ProSitePatterns Uncharacterized protein family UPF0076 signature. 163 181 IPR019897 -
Pvu6g0453 187 CDD YjgF_YER057c_UK114_family 79 185 - -
Pvu6g0453 187 SUPERFAMILY YjgF-like 64 187 IPR035959 -
Pvu6g0453 187 Gene3D - 61 187 IPR035959 -
Pvu6g0453 187 PANTHER PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0453 Pvu-Chr6 15666930 15670217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0453 K09022 - gmx:100785544 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0453 6 15666930 15670217 Pvu6g0453 6 15666930 15670217 ECH
Pvu6g0453 6 15666930 15670217 Pvu8g2756 8 57784379 57786808 PCT