Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0442 ATGGAGAATTCCAGGTTTGGTGCTTTTTTGAGGAGTAGAAGAATGGATAGCTTCTTGAGCACAAGTTCTGAGAAGAGGGTGGTAGATAATCCAAACGTTTCAATAAAAGATGAATCTGAAAGAAGGCCTAAGATGGATGCTTTTGTTGATGATGATGGATGGGTTCCTGTGATCATATCTTGGATCAGAATTGTGACTTGTTTTGTTTCTATGATGCTCACAACACTTATCTGGGCATTGATCATGCTTGTGCTTATACCATGGCCCTATGAGAGGATTAGGCAAGGAAACATATATGGGCATGTGACTGGCAGAATGCTGATGTGGATTCTTGGGAATCCTATAAAAATTGAAGGTGCTGAGTACTCCAACAAGAGGGCCATTTACATCAGTAATCATGCATCTCCAATTGACATATTTCTGATAATGTGGTTGACTCCTACAGGTACTGTAGGTATTGCAAAGAAAGAGATCATATGGTATCCTCTATTTGGCCAACTTTATGTTTTGGCCAATCATCTTCGTATAGATCGGTCCAATCCAATGGCAGCTATTGAGTCCACGAAAAAGGCAGCTCAAGCAGTAGTGAAGAACAATCTGTCACTGATAATTTTCCCAGAGGGCACAAGGTCTAAAAATGGACGACTTCTACCTTTCAAAAAAGGTTTTGTTCATTTGGCTCTGCAATCTGGTCTTCCAATTGTTCCAGTGGTTCTGACAGGTACTCATCTGGCATGGAGAAAAGGAAGCTTACATGTCAGACCAGCACCACTTACTGTCAAGTATCTTCCTCCTATAAGCACTGAAAATTGGACACTCAGCAAGATTGATAACTATGTTAACATGTTACATAACATGTATGCAGAAAATCTTCCCAAATCTCAGAGACCTCTGCCTTGA 900 0.4056 MENSRFGAFLRSRRMDSFLSTSSEKRVVDNPNVSIKDESERRPKMDAFVDDDGWVPVIISWIRIVTCFVSMMLTTLIWALIMLVLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYSNKRAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYVLANHLRIDRSNPMAAIESTKKAAQAVVKNNLSLIIFPEGTRSKNGRLLPFKKGFVHLALQSGLPIVPVVLTGTHLAWRKGSLHVRPAPLTVKYLPPISTENWTLSKIDNYVNMLHNMYAENLPKSQRPLP* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0442 299 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 67 286 - -
Pvu6g0442 299 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ALPHA 54 295 - -
Pvu6g0442 299 Pfam Acyltransferase 115 239 IPR002123 GO:0016746
Pvu6g0442 299 CDD LPLAT_AGPAT-like 105 277 - -
Pvu6g0442 299 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 54 295 - -
Pvu6g0442 299 SMART plsc_2 127 242 IPR002123 GO:0016746
Pvu6g0442 299 TIGRFAM AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 123 239 IPR004552 GO:0003841|GO:0008654|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0442 Pvu-Chr6 15504407 15507795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0442 64 242 Acyl Lipid Metabolism Gene Families AT4G30580 31.746 8.15e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0442 K13509 - pvu:PHAVU_006G042300g 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0442 6 15504407 15507795 Pvu6g0442 6 15504407 15507795 ECH