Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0440 ATGGGTTGCAGAAACAGGGACTCATTAGCAGAGAATCATTCTTCACCTTCTTGTGATTCGCTCAGCGAGGCCTTGCTTTTTACCACCTTGTGCATCGTGGGTCTCCCTGTGGATGTTCATGTCAAGGATGGCTCTGTGTATTCTGGAATCTTCCATACCACTTCTGCTCACGCCGATTATGGTATTGTTTTGAAGAAAGCAAGGATGACCAAGAAGGGAAAAGGCAACACCAATGTTGGAAATGAGGGTTTTGTGGATACTCTGGTGATTCTATCCAGTGATCTTGTGCAAGTTGTTGCTAAGGGAGTAATGCTTCCTGCGGATGGTGTTGGTGAAAACATAACTGGTGATGATGAAGAAGCAGTTGCACATAATGTATCTCCTGAGAGTCTAACGTGTGAGGTAGAGAATCATACAAAGCCCTTGATGGATGCAAAACAAGTTAATCAATCAAGACAAGTCGAAGATGACAAGTCAAACTTAAAAGGGAAAGCTGATGACCACAGGCAGAAGTCTGAGGTTTTTAATGGAAAAAGTGATGAAAAGATTCAAAGCCTCAATTCAAGACATGAAAGCCAACAGGTAGCTGTTGAGCATGGAGGCACAGACAGGACATCAAATCCATCCAATAACGGATTATTCTGCAATAGTGCTCCAGCATCTGTTAAAGCCAATGATTGGGTTAGTGAAAGGTCTGCTTCAGCAGAGTCTATCTCTACAAATTCAACCCAAGGCGTGGATCTCATCACCGAGTCACATCCAGCAAGGTCCATTGAAATATCTGCTCCAAGGAGTACAGATTCTACCAGAAATACTAAGGAATTTAAGCTCAATCCAGCTGCCAAAACCTTCTCTCCATCTTTTGTGAATCCTATATCATCAGCTTCTGTGGCAAATTTGTTATACATACAAAATAGCTCTCCTGTGGTACCTGTTGCTAGTATTCAACCAGAAGTTGGATTCAACACTTTTGCTTCTCGGCCTTCAGTGCCAGTAAAGGTCGCACAGTATAGTAATTTGACAATGGGAAATGGTGGAAGTGGCTCACAGTTTTCACCACCTATTATTGCACATGTGCCACATAGAAACCAACCCCTCCGGTATCCTACACATTACACTCCTGTTTTGTCTGAACCTGCTTATATGCAACCAAGCTCTCCTGCTGTAATGGTTGGACGTTCCCCCCAGTTGGTATATGTTCAGCCACTTTCCCATGATTTATTTCATGGAACAACAGCCGTTGCACCCGTATCGGCTCGCCCTCTGTTGAATCATCATGTACCATTTCCAAAGCAGCAAGGAGGAGCAATGGGTCCAGCAATGCCAGTTTGTGTGCCCCCTCCTGTCCTAACAGGTGGACATCAGCCCTTTGCACTTCAAAGCCACATTCCCCTTCTGCAACCTGGCTTTCCTGTCACACGACCTATTTCAGTCCCAGGACCAAATGGTTTCTATGGCACTAAATTTTAG 1470 0.4435 MGCRNRDSLAENHSSPSCDSLSEALLFTTLCIVGLPVDVHVKDGSVYSGIFHTTSAHADYGIVLKKARMTKKGKGNTNVGNEGFVDTLVILSSDLVQVVAKGVMLPADGVGENITGDDEEAVAHNVSPESLTCEVENHTKPLMDAKQVNQSRQVEDDKSNLKGKADDHRQKSEVFNGKSDEKIQSLNSRHESQQVAVEHGGTDRTSNPSNNGLFCNSAPASVKANDWVSERSASAESISTNSTQGVDLITESHPARSIEISAPRSTDSTRNTKEFKLNPAAKTFSPSFVNPISSASVANLLYIQNSSPVVPVASIQPEVGFNTFASRPSVPVKVAQYSNLTMGNGGSGSQFSPPIIAHVPHRNQPLRYPTHYTPVLSEPAYMQPSSPAVMVGRSPQLVYVQPLSHDLFHGTTAVAPVSARPLLNHHVPFPKQQGGAMGPAMPVCVPPPVLTGGHQPFALQSHIPLLQPGFPVTRPISVPGPNGFYGTKF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0440 489 MobiDBLite consensus disorder prediction 188 217 - -
Pvu6g0440 489 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 1 486 - -
Pvu6g0440 489 MobiDBLite consensus disorder prediction 150 187 - -
Pvu6g0440 489 PANTHER ATAXIN 2-RELATED 1 486 IPR045117 GO:0003723
Pvu6g0440 489 MobiDBLite consensus disorder prediction 144 217 - -
Pvu6g0440 489 Coils Coil 151 171 - -
Pvu6g0440 489 Pfam Ataxin 2 SM domain 23 101 IPR025852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0440 Pvu-Chr6 15455077 15462148 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0440 - - var:108318922 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0440 6 15455077 15462148 Pvu6g0440 6 15455077 15462148 ECH