Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0430 ATGGAACTGAAACTACTTCTGACGGTTTTATTGATTCAGTCTGCAACTGTGCCTGCTGATTACATTCGACCTCCGCCTCGAAAAGCCTTTCATCTTCCATGGCATTCTAAACCCTCCTCTTACCCTCAACAGGTACACATTTCTTTAGCAGGAGACCAGCACATGAGAGTTACTTGGATTACCGATGATAATTCTGCACCTTCAATTGTAGAATATGGAACATCACCAGGGCAATATGACTCTGTAGCTGAAGGAGAGAACACCTCTTACAGTTATATGTTCTATAACTCAGGAAAGATACACCATACCGTTATTGGACCTTTGGAGCATGATTCTGTGTACTACTATCGATGCGGTCAACAAGGTCCCGAGTTCCAGCTCAGAACTCCTCCAGCTCAACTTCCAATCACTTTTGCTGTGGCTGGGGATTTGGGTCAAACTGGATGGACTAAATCAACATTGGATCACATTGACCAATGTAAATATAATGTTCACCTACTTCCAGGAGACCTTGCATATGCTGATTATATCCAGCGTCACTGGGACTCGTTCGGTAGGCTAGTGCAGCCACTTGCTAGTGCAAGACCATGGATGGTAACACAAGGGAACCATGAAGTAGAGAGCATACCTTTGTTAAAGGATGGGTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGCGGATCAAATTCAAATCTCTTTTATTCATTTGAAGTTGCAGGTGTTCACATTATCATGCTTGGGTCCTATGCAGATTATGATGAGTACTCTGAACAATATAGATGGCTTAAGGAAGATCTTTCAAAGGTGGACAGGAAAAGGACACCTTGGTTACTTGTGTTATTTCATGTGCCATGGTATAATAGTAACACAGCTCATCAAGGAGAAGGGGCTGATATGATGGCAGCTATGGAGCCATTGCTTAATGCTGCTAGCGTGGATTTAGTTCTCGCAGGTCATGTGCATGCTTATGAACGCTCGAAACGTGTATACAATGGAAGAGTTGACTCTTGTGGTTCAGTCCACATAACCATTGGCGATGGAGGAAACAAAGAAGGCTTAGCTCATAAATATATAAATCCACAGCCAATATGGTCAGAATTCCGTGAAGCCAGTTTTGGTCACGGCGAGCTAAAGATTGTAAACTCTACGCATGCTTTCTGGAGTTGGCACAGGAATGACGATGATGAGCCAGTAAAATCTGATGATATCTGGATAACCTCTTTGATCAGCTCAGGATGTGTTGATCAGAAGAGAAATGAGCTTAGGAATAAACTTATGACACCTTAG 1299 0.4265 MELKLLLTVLLIQSATVPADYIRPPPRKAFHLPWHSKPSSYPQQVHISLAGDQHMRVTWITDDNSAPSIVEYGTSPGQYDSVAEGENTSYSYMFYNSGKIHHTVIGPLEHDSVYYYRCGQQGPEFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLAYADYIQRHWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFVSYNSRWKMPFEESGSNSNLFYSFEVAGVHIIMLGSYADYDEYSEQYRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNTAHQGEGADMMAAMEPLLNAASVDLVLAGHVHAYERSKRVYNGRVDSCGSVHITIGDGGNKEGLAHKYINPQPIWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSLISSGCVDQKRNELRNKLMTP* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0430 432 Pfam Purple acid Phosphatase, N-terminal domain 42 123 IPR015914 GO:0003993|GO:0046872
Pvu6g0430 432 Pfam Iron/zinc purple acid phosphatase-like protein C 344 399 IPR025733 -
Pvu6g0430 432 Pfam Calcineurin-like phosphoesterase 137 327 IPR004843 GO:0016787
Pvu6g0430 432 PANTHER PURPLE ACID PHOSPHATASE 18 5 423 - -
Pvu6g0430 432 SUPERFAMILY Metallo-dependent phosphatases 135 402 IPR029052 -
Pvu6g0430 432 CDD MPP_PAPs 135 411 IPR041792 -
Pvu6g0430 432 Gene3D - 133 419 IPR029052 -
Pvu6g0430 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 28 131 IPR008963 GO:0003993|GO:0046872
Pvu6g0430 432 Gene3D - 41 132 - -
Pvu6g0430 432 PANTHER ACID PHOSPHATASE RELATED 5 423 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0430 Pvu-Chr6 15191461 15196112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0430 42 422 Miscellaneous Gene Families AT1G13900 25.551 5.22e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0430 K22390 - gmx:100782338 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0430 6 15191461 15196112 Pvu6g0430 6 15191461 15196112 ECH
Pvu6g0430 6 15191461 15196112 Pvu8g2751 8 57734357 57737318 PCT