Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0418 ATGGTTTCAAGTGAAGGTGAGTTCAGAATGCCAACTGAAGGTGAGTCCAGAAAGCCAACTGAAGGTGAGTCCAGAATGTCAAGTGAAGAGTTCAAAGAGTGGGTATTGGAAGAAAGATGGAAGCACGTTATTAATGCATATGAGAACGACAGTGAGTACCACAAAGTCATAATCAACGAAAGCAGAGGCACTGCACTGCATGTGGCAGTGAATGATGGGAATGTGGAGCTTGTTAGCATTCTTGTTGAAGCAATCTTGAGGCATGAAGGGAGGGGAAAGTTGAGCTATGAAAGTGCACTGAGATCAACCAATGAGAGAGGGAACACTCCTTTGCATCTTGCAGCTTCCAGAGGGTTCATTGGCATGTGTAAGTTCATCATAGGGGAAAATGGTGAAAGGAAGGATTTGATTAGGGTTAGGAACAACAACGGTGAAACACCTATTTTCAAGGCTGGGCTCACAGGCCAAACAAAGGCCTTTGTGTACCTTCATGCTGTTTCCAAAGATTTAGATGTTTCACTTAGGAACGATCATGAAGACACCATCCTTCACCAAGCCATTTGGAGAGAATTCTTGGATTTGGCAATTATAATAAACCATTGTTATCCTGGACTTGTGAACATACGAAACAACGATGATGCCACACCTCTCAAAGTTCTTGCTTGCAGACCTTCAGCGTTCAAGAGTGGAAACAATCTCCCATGGTGGAAGCAAATTCTATATTATTTGAATATAGAAGATGAAGACAAGAAAGCACAAATATTTGTGAAAGAAAAACATGTTTCTTTTGTTCGATCTATAGAGAGTATTGTTCGATTTGCATTAAAATGTCTTAGACCTTCAGATTGGAGTGTCAATCCACTAGACTTGAAAGCAATAAAGAAGATAAAGCAAAAACACAATTGGAGTGTTCAACTCTTGACTTTTTTTATGAGAAACCCTTATATGGACATAGGAATTGCTGGAGACAAACCATCCATGAAATATTCCAGAGATTATAGAGAATTCGGCCCATTTATTTCCCAAGAACAGTTGAAAAAAGAGGAAAAGGTGTCTGCATTTTTGACAGCAGCAAGAAACGGCATTGAGGAAATTGTGCTTGGACTTCAATCTAAAGTACCAAGTGTCGTACATGAAACTAGCCCTAGAAATGAAAATGTATTGCTTGTGGCAGTTAAGAATAAGCAAGTCAGTGTTACTGACTTGTTGCGGAAGAATTTGAAAAAAGAAATTTTTGATAGCTTAATTTTAGAAATGGATGACATAGAGAACACAGTGTTACACTTAGCAGCAGGTACATCAATCAACAAAAGGACTAGTAATACCATGCAAATGATAAGGGATATCAAGTGGTACGAGTACATCAGTGGCCTAGTGCCGGAAGAATTCAATTATAGACGCAACAAATATAAACACACTGCATGGGAAATCTATGAGCGGAAACACATGCAGAAAGTGAAAGATTCCTCAGATGCCCTAAAGGACTTATCCAATTCTGCCTCAGTTGTGGCAGCTCTGATCGCCGGAGTTTCCTTCGCAACATCGGGTTCCCTGCCCGGCAGCACCGAGGACGGAAAACCTATCTACAGTGACCAACCTGCATTTGATGTATTTTCCATGGCTGCACTATTTGGACTAGGCTTCTCCATCACCGCACTAGTAATGTTCCTCGCCATACTCACTTCTTCAAAACAGGCTCAAGACTTCCGCTTCAGCTTGCCCTTGAAGCTTATCTTCCGCTTAGGTTCTCTTTTTGCATCCGTTGCTTCCATGCTCGTTTCGTTTTGGGCTGCATATTTCTTTGTGCTCAATGAAAAGTACAAGAGAATAATCTTCCCTGTTTGTGCTGCCACTTGCTTGCCGCTCACTATCTATGCAGTCATGCAATTTCCATTTTATGTTGAGCTTCTTAGAGTTATTTCCAGCAAGACGCCACTGCCATACAGGACTCATCACCCATTTATAGGTCCTACTTTCTCTAGATAA 1986 0.4114 MVSSEGEFRMPTEGESRKPTEGESRMSSEEFKEWVLEERWKHVINAYENDSEYHKVIINESRGTALHVAVNDGNVELVSILVEAILRHEGRGKLSYESALRSTNERGNTPLHLAASRGFIGMCKFIIGENGERKDLIRVRNNNGETPIFKAGLTGQTKAFVYLHAVSKDLDVSLRNDHEDTILHQAIWREFLDLAIIINHCYPGLVNIRNNDDATPLKVLACRPSAFKSGNNLPWWKQILYYLNIEDEDKKAQIFVKEKHVSFVRSIESIVRFALKCLRPSDWSVNPLDLKAIKKIKQKHNWSVQLLTFFMRNPYMDIGIAGDKPSMKYSRDYREFGPFISQEQLKKEEKVSAFLTAARNGIEEIVLGLQSKVPSVVHETSPRNENVLLVAVKNKQVSVTDLLRKNLKKEIFDSLILEMDDIENTVLHLAAGTSINKRTSNTMQMIRDIKWYEYISGLVPEEFNYRRNKYKHTAWEIYERKHMQKVKDSSDALKDLSNSASVVAALIAGVSFATSGSLPGSTEDGKPIYSDQPAFDVFSMAALFGLGFSITALVMFLAILTSSKQAQDFRFSLPLKLIFRLGSLFASVASMLVSFWAAYFFVLNEKYKRIIFPVCAATCLPLTIYAVMQFPFYVELLRVISSKTPLPYRTHHPFIGPTFSR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0418 661 SMART ANK_2a 61 90 IPR002110 GO:0005515
Pvu6g0418 661 SMART ANK_2a 143 172 IPR002110 GO:0005515
Pvu6g0418 661 SMART ANK_2a 106 135 IPR002110 GO:0005515
Pvu6g0418 661 SMART ANK_2a 383 413 IPR002110 GO:0005515
Pvu6g0418 661 MobiDBLite consensus disorder prediction 10 26 - -
Pvu6g0418 661 SUPERFAMILY Ankyrin repeat 44 431 IPR036770 -
Pvu6g0418 661 Pfam Ankyrin repeats (many copies) 63 127 IPR002110 GO:0005515
Pvu6g0418 661 ProSiteProfiles Ankyrin repeat region circular profile. 106 127 - -
Pvu6g0418 661 PANTHER REPEAT PROTEIN, PUTATIVE-RELATED 40 242 - -
Pvu6g0418 661 PANTHER REPEAT PROTEIN, PUTATIVE-RELATED 263 647 - -
Pvu6g0418 661 MobiDBLite consensus disorder prediction 1 26 - -
Pvu6g0418 661 ProSiteProfiles Ankyrin repeat profile. 106 127 IPR002110 GO:0005515
Pvu6g0418 661 Gene3D - 20 268 IPR036770 -
Pvu6g0418 661 PANTHER CASKIN 263 647 - -
Pvu6g0418 661 PANTHER CASKIN 40 242 - -
Pvu6g0418 661 Pfam Domain of unknown function 492 601 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0418 Pvu-Chr6 14981701 14990935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0418 344 606 Miscellaneous Gene Families AT3G12360 23.397 1.24e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0418 - - pvu:PHAVU_006G039900g 1317.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0418 6 14981701 14990935 Pvu6g0418 6 14981701 14990935 ECH