LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu6g0411	ATGAAGCACCCAAAACCCCAAAACCAAACAAACCCAACACCATCACCCTCATCAAGATCTTCATCCTCATCTTCTTCACTCTCATCCCACCTTGCTATGGTGGAGCTCAAGCAGAGGATCCTCACCTCCTTATCCAAGCTCTCCGACCGCGACACGCACCAGATCGCGGTCGAGGACCTCGAGAAGACCATTGCTGCGCTCTCGCCGGACGCCATTCCCATGATTCTCAACTGCCTCTACGACGCCGCCACCGACCCAAAGCCCGCCGTCAAGCGAGACGCCCTGCGCCTCCTCGCCGCCGTCTGCGCCGCCCACGCCGATGCCGCGGCCGCGCACCTCACCAAGATCATCGCCCATGTCGTGCGCCGCCTCAAGGACGCCGACTCCGCCGTGCGAGACGCCTGCCGCGACACCGTCGGCGCGCTTGCGGCGCAGTATCTGAAGGGCGACGGCGGGGGAGGGGGGGTCGGGACGGTGGTGGGGCTGTTCGTGAAGCCGCTGTTCGAGGCCATGGGGGAGCAGAACAAGGGGGTGCAGGCGGGCGCGGCGGTGTGCATGGCGAAGATGGTGGAGTGTGCTGGCGGCGGAGGGGAGGCGCCGGTGCCGGCGTTCCAGAAACTTTGTCCGAGGATCTGCAAGCTGCTCAGCAGTCCCAATTTCATGGCCAAGGCGGCGATTTTGCCGGTGGTTGCCAGCTTGTCACAGGTTGGAGCAATTGCACCACAAAGTTTGGAACATTTGCTGCCCAGCATCCATGAATGTCTTTCAAGTACGGATTGGGCAACACGTAAAGCAGCAGCTGAGGCATTAAGTTCTTTGGCATTGCATTCAAGCAGTTTGGTTATTGATAAAGCAGCACCCACACTGGAAGTACTCGAGGCTTGCCGATTTGACAAGATAAAACCTGTAAGAGATAGCATCAATGAGGCATTGCAATTGTGGAAAAAGATCGCAGGAAAAGGAGATGGGTCCCTTGATGATTCAAAGCCCTCGTCTGATGGTGGGAATGAATCAGCTATTTCGTCAGATACAAGTGACCCGAAAAAAGTAAGTCTTGATGAGAGGAAGACTAATTCATCAACTAGTTCTTCAAACTTGGATTCAAATTCTAAGGCCAAAGCAGCTGGCATCTCTGAGAAGGCAGTTGTAATACTGAAAAAGAAAGCACCCGCCTTATCTGATAAAGAACTAAATCCAGAATTTTTCCAAAAACTTGAAAGAAGGGGTTCGGATGATTTACCAGTGGAAGTAGTTGTTCCTCGGAGAGGCCTTAATTCTTCTAACTCCAACAACGAGGAAGAGTCAGAGGCAAATGTTAAAGATTCAAAAGAAAGAACAAGTTCTGTTGGAAACATCCCTAATGATGATTTTCATGGATCCTTAAGTAATAAATATCGTATCTTTGAGAGAGGCAATGATGGAAATTCTAAACAAAGGAATTATGATGATTTTGGCCATGACAGATACCCTGAAAGAAGGGTGAACTCAAAAGAACCTAGGACTAAGGCATATGATACTGATGATAGGGCTGAAAATGATCAGAGGGAGGGTTCTGCCAATCTTTCAGGTTTTTCTAAAACTGATGGTCAATCTGAAGTACCCTTCTCCAATAACAGAGGAAATTGGTTGGCCATCCAGAGGCAGTTGCTGCAACTGGAAAGGCAACAAGTTCATCTAATGAATATGCTTCAGGATTTCATGGGTGGATCACATGATAGTATGGTGACTCTAGAGAATAGAGTGCGAGGTCTAGAGAGAATTGTTGAAGACATGTCTCGAGATTTATCCATATCATCAAGTCGTAGAAACTTTACAGGGTTTGAAGGATCATCTAGCAGGCCATCTAGCAAGTATAATGGTTTCAATGACTACTCCAGTTCCAAATATGGAAGAGGCGGTGATGGACGCATCCAATTTGGTGAAAGATTTTCCCAATCTGATGGAAATGCTTTGGGAATGAGGGGAAGAGGGCCATCTTGGAGATCTGACATGTCTGAAGGGTGGGATCTTCCTGGGTATGGTTCTTCTAGAAATAATAGCCAGGTTCCTTCAAGGAGGGCTTTTGGTGGTAGTTCTGCTGATGGAAGATCACCAAAATCTGTGCATGAGAGTGATCAATCAGGAAATAGGAGAGCTTGGGATAAAGCAGCAATGCCCATCCGGCTTGGTGAGGGACCCTCTGCTAGAAGTGTCTGGCAAGCTTCTAAGGACGAAGCTACCTTGGAAGCAATTCGGGTTGCTGGTGAGGACAATGGAGCATCTCGAGCAACAAGGGTAGCAATCCCTGAAATGACTGCAGAAGCTCTTGCTGATGACAATGTTGGGCAAGAGAGGGATGCCATCTGGACTTCTTGGACCAATGCAATGGATGCCCTTCAAGTAGGTGACACAGATTCAGCCTTTGCAGAAGTATTATCCACTGGTGATGATATTTTGCTTGTAAAGCTAATGGATAGAACAGGTCCTGTAATTGACCAACTTTCAAGTGAAGTTGCATGTGAAATTGTGAATGCCATTGGACAATTCTTACTGGACCAGAACATGTATGACATCTGCTTGTCTTGGATCCAACAGTTGCTGGAGATAGTATTGGAAAATGGAGCCGATACCTTTGGCATCCCCATGGAAATGAAGAAAGAGCTATTACTGAATTTACATGAAGCTTCTACAGATACAACTGAGGCTTGGGAAGGGGTACATCCTGATCAGCTTTTATTGCAGTTGGCATCAGCCTGGGAAATTGATCTACAACAGCATGACAAATAG	2766	0.4823	MKHPKPQNQTNPTPSPSSRSSSSSSSLSSHLAMVELKQRILTSLSKLSDRDTHQIAVEDLEKTIAALSPDAIPMILNCLYDAATDPKPAVKRDALRLLAAVCAAHADAAAAHLTKIIAHVVRRLKDADSAVRDACRDTVGALAAQYLKGDGGGGGVGTVVGLFVKPLFEAMGEQNKGVQAGAAVCMAKMVECAGGGGEAPVPAFQKLCPRICKLLSSPNFMAKAAILPVVASLSQVGAIAPQSLEHLLPSIHECLSSTDWATRKAAAEALSSLALHSSSLVIDKAAPTLEVLEACRFDKIKPVRDSINEALQLWKKIAGKGDGSLDDSKPSSDGGNESAISSDTSDPKKVSLDERKTNSSTSSSNLDSNSKAKAAGISEKAVVILKKKAPALSDKELNPEFFQKLERRGSDDLPVEVVVPRRGLNSSNSNNEEESEANVKDSKERTSSVGNIPNDDFHGSLSNKYRIFERGNDGNSKQRNYDDFGHDRYPERRVNSKEPRTKAYDTDDRAENDQREGSANLSGFSKTDGQSEVPFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSSRRNFTGFEGSSSRPSSKYNGFNDYSSSKYGRGGDGRIQFGERFSQSDGNALGMRGRGPSWRSDMSEGWDLPGYGSSRNNSQVPSRRAFGGSSADGRSPKSVHESDQSGNRRAWDKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGASRATRVAIPEMTAEALADDNVGQERDAIWTSWTNAMDALQVGDTDSAFAEVLSTGDDILLVKLMDRTGPVIDQLSSEVACEIVNAIGQFLLDQNMYDICLSWIQQLLEIVLENGADTFGIPMEMKKELLLNLHEASTDTTEAWEGVHPDQLLLQLASAWEIDLQQHDK*	922

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	516	533	-	-
	Pvu6g0411	921	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1	21	921	-	-
	Pvu6g0411	921	SUPERFAMILY	ARM repeat	41	845	IPR016024	-
	Pvu6g0411	921	Gene3D	-	35	149	IPR011989	-
	Pvu6g0411	921	SMART	TOG_3	65	306	IPR034085	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	601	731	-	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	1	28	-	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	329	346	-	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	413	533	-	-
	Pvu6g0411	921	PANTHER	MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1	21	921	IPR033337	GO:0005874\|GO:0008017
	Pvu6g0411	921	Coils	Coil	574	594	-	-
	Pvu6g0411	921	Gene3D	-	150	312	IPR011989	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	322	372	-	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	601	626	-	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	356	372	-	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	672	687	-	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	444	458	-	-
	Pvu6g0411	921	MobiDBLite	consensus disorder prediction	470	515	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu6g0411	Pvu-Chr6	14895274	14902710	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu6g0411	-		-	gmx:100804845	1556.19

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu6g0411	6	14895274	14902710	Pvu6g0411	6	14895274	14902710	ECH