Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0405 ATGGCTTCTATCCCATGCATCACCCACCCCCCCATCACTTCCAAGCTCAACAATTTCCTCCCTTCACCTCACGTTTCTGCCTCACGGTTTCTGGGCACACAAAAAAGTGTTGGGTGGCTCAGCCTCACCTCCAGAATTGGCCCCTCCAACGGCTCCAAAGCCACGTGCTGGTTCAGGTTCGGCAAGAACGGTGTTGACGCCCAAGGTGCTGGCATTTATGGCAGCCAGGCCCGTGATGACTTTGACAGAGATGATGTGGAACAGTACTTCAACTACATGGGGATGCTGGCTGTAGATGGTACCTATGATAGAATGGAAGCTCTTCTAAGCCTAAAGATCCACCCTGTGGACATCCTTCTCCTATTAGCTGCATCAGAAGGTGACAAGCCAAAAATTGAAGAACTCTTGAAAGCTGGAGCAAAATATGACGTAAAAGATGGAGAGGGTAGGACGGCACTGGACAGGGCCAACGAAGAAATTAAAGATTTCATTCTTAATTTTTCAGTGCAAAGGGCATGA 519 0.4894 MASIPCITHPPITSKLNNFLPSPHVSASRFLGTQKSVGWLSLTSRIGPSNGSKATCWFRFGKNGVDAQGAGIYGSQARDDFDRDDVEQYFNYMGMLAVDGTYDRMEALLSLKIHPVDILLLLAASEGDKPKIEELLKAGAKYDVKDGEGRTALDRANEEIKDFILNFSVQRA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0405 172 SUPERFAMILY Ankyrin repeat 95 165 IPR036770 -
Pvu6g0405 172 Gene3D - 116 171 IPR036770 -
Pvu6g0405 172 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 172 IPR044242 GO:0006886|GO:0009570|GO:0090391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0405 - - gmx:100499940 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0405 6 14843654 14846550 Pvu6g0405 6 14843654 14846550 ECH