Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0043 ATGGCAGTAATAATGGCTTTGCATGGTTATTGTTATAGCAATATAAAGTTGGGAAATCAGCGAAGAGCATTACACAATCTCAGTTTTCCAGGCTCAATTTCAGTTCATAAATTGCCAAAGAATAGAAGGTCAAAATCTGATAAGTCAGAGAATGATAAATCTCCTAGATTCCTGGTTGAAATGCGACAGACAGAATTGCCTCCATCAAAATATGGTACAAATGGTAGAGTTGTTAAAATGGTTCCAGCAAGTGAGGTAGTGAAAAGAAAGACAATGTCAGAGAATAAAGTGGAAATGGGGAGCAGTTCAAAGAAAGCTGTTAATGGAGCAAGTTTGGTAAGAAGAGACCCTAGCCCGGCCTTGACAAAGACAGTGAAATCTAGAACCTCTAAGGAACTTCCACCACTGGAAGAGCTAAAAGTTTTGCCCTCAGATGAAGGCTTCAGTTGGGCCAATGAAAATTACAATTCCGTGCAGAGATCTATTGATGTTTGGTCTTTTGTTATTTCTTTACGTATTCGAGTTCTGTTGGACAATGGAAAATGGGCATATTTGGGTGGCTTTACAGAAGAAAAGCAGAAAAGAAGAAGGCAGAAAACTGCTGCATGGCTAAGGGAGTGTGTATTACAGCTTGGCCCAACTTTCATTAAACTTGGACAGTTATCATCAACAAGGTCGGATCTATTTCCCCGGGAGTTTGTAGATGAGCTTGCAAAATTGCAGGATAGGGTACCTGCTTTTTCTCCGAAGAAAGCAAGAGGCTTTATTGAGAGTGAATTAGGAGCTCCCATTAATGTATTGTTTAAAGAGTTTGAAGATCGGCCTATTGCTGCTGCTAGTCTTGGTCAGGTTCATCGAGCTATATTACACAATGGAGAAAAAGTAGTTATCAAAGTTCAAAGGCCTGGGCTAAAGAAGCTTTTTGACATTGACTTGCGAAACTTAAAGCTGATTGCAGAATATTTTCAGAGAAGTGAAACTCTAGGTGGTCCGACAAGAGATTGGGTTGGTATATATGAAGAATGTGCAACGATTTTGTATCAAGAAATTGATTATATAAATGAAGGAAAGAATGCTGATAGATTCCGCCGAGATTTTCGAAACATAAAGTGGGTCCGAGTACCTCTGGTTTATTGGGATTATACTGCATCGAAGGTGTTGACATTGGAGTACGTACCAGGTATCAAAATAAATGAAGTGGATATGTTAACTTCACGTGCTTATGATCGATTACGAATCTCATCACGCACTATTGAGGCATACTTGATTCAGATATTGAAAACAGGTTTCTTTCATGCTGATCCACATCCTGGAAATCTTGCCGTTGATGTTGATGAAGCAATTATTTATTATGACTTTGGCATGATGGGGGATATAAAATCTTTCACCCGAGAGAGACTGCTTGAACTGTTCTATGCTGTTTATGAGAAGGATGCCAAAAAGGTAATGCAATGCCTTATAGATCTTGGAGCCCTCCAACCCACTGGTGACCTGTCATCTGTTAGGAGATCTGTACAGTTTTTCTTGGACAATCTTCTAAGCCAGACACCAGATCAACAACAGACTTTATCTGCAATTGGGGAGGATTTATTTGCTATAGCACAAGATCAGCCTTTCCGTTTTCCATCTACCTTCACTTTTGTCATTAGAGCATTTTCTACACTTGAAGGCTTAGGTTATATACTCAATCCAGATTTCTCCTTTGTGAAGATCGCTGCACCTTATGCACAGGAGCTTCTAGATATAAGGCAAAAGCAGCGCACTGGGCCACAGCTTGTTGAGGAGATAAGGAAACAAGCTGATGATGTAAGAACCAATTCGATAACAATGCCATACAGAGTTCAAAGAATAGAGGAATTTGTCAAGCAACTCGAGTCAGGAGATCTGAAACTCCGAGTTCGAGTTCTTGAGTCTGAAAGAGCTGCTAGGAAAGCAACAATTTTACAAATGGCTACTATGTATTCGGTATTGGGGGGAACCTTGCTAAATCTTGGTATCACTTTGAGTAGCCAAGGCAATCAAGCGTTTGCAAATGGATCATTCCTTGGTGCAGGCGTTTTTGCAGCACTACTTTTAAGGTCTATGCAACGGGTGAAGAAACTTGAGAAGTTTGAGAAAATGATATAA 2127 0.3996 MAVIMALHGYCYSNIKLGNQRRALHNLSFPGSISVHKLPKNRRSKSDKSENDKSPRFLVEMRQTELPPSKYGTNGRVVKMVPASEVVKRKTMSENKVEMGSSSKKAVNGASLVRRDPSPALTKTVKSRTSKELPPLEELKVLPSDEGFSWANENYNSVQRSIDVWSFVISLRIRVLLDNGKWAYLGGFTEEKQKRRRQKTAAWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPKKARGFIESELGAPINVLFKEFEDRPIAAASLGQVHRAILHNGEKVVIKVQRPGLKKLFDIDLRNLKLIAEYFQRSETLGGPTRDWVGIYEECATILYQEIDYINEGKNADRFRRDFRNIKWVRVPLVYWDYTASKVLTLEYVPGIKINEVDMLTSRAYDRLRISSRTIEAYLIQILKTGFFHADPHPGNLAVDVDEAIIYYDFGMMGDIKSFTRERLLELFYAVYEKDAKKVMQCLIDLGALQPTGDLSSVRRSVQFFLDNLLSQTPDQQQTLSAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGLGYILNPDFSFVKIAAPYAQELLDIRQKQRTGPQLVEEIRKQADDVRTNSITMPYRVQRIEEFVKQLESGDLKLRVRVLESERAARKATILQMATMYSVLGGTLLNLGITLSSQGNQAFANGSFLGAGVFAALLLRSMQRVKKLEKFEKMI* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0043 708 Pfam ABC1 atypical kinase-like domain 239 485 IPR004147 -
Pvu6g0043 708 MobiDBLite consensus disorder prediction 31 55 - -
Pvu6g0043 708 CDD ABC1_ADCK3-like 239 486 - -
Pvu6g0043 708 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 135 700 - -
Pvu6g0043 708 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 7, CHLOROPLASTIC 135 700 - -
Pvu6g0043 708 SUPERFAMILY Protein kinase-like (PK-like) 241 482 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0043 Pvu-Chr6 1539118 1558251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0043 - K13457 gmx:100794474 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0043 6 1539118 1558251 Pvu6g0043 6 1539118 1558251 ECH
Pvu6g0043 6 1539118 1558251 Pvu8g2975 8 59241786 59249425 PCT