Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0037 ATGGGAAAGTTTGCCCTACCCAATCTCCTCTTGTTCCTTCTCTTCAACTTCACCACCTTGCTCAATGTTCTTGCTTGTCCTTATTGCCCTTACCCCTCTCCTAAGCCCCCCAAACACCACCCCATAGTGAAGCCACCACCAGTTCACAAACCACCCAAACCCTGTCCTCCACCCCACTCATCTCCCAAACCTCCACATGTGAATCCACCCTATGTTCCAAAACCTCCTCACTACCCTAAGCCACCAGTGCATCCACACCCCCCCTATGTCCCAAAACCTCACCCTAAGCCACCACTTCACCCACATCCTCCTTATGTTCCACTACCTCCAGTTGTCAAACCACCCCCCTATGTCCCAAAACCACCATATGTCCCCAATCCACCAGTTGTCACACCACCTTACATTCCTAAGCCTCCTGTTGTCACACCACCCTATATCCCTAAACCACCTGTTGTTCCGGTTATTCCTCCTTACATCCCTAAACCACCAGTCGTCCCAGTTACACCACCCTACATCCCTAAACCACCGGTTGTCCCGGTTACACCTCCTTACGTTCCTAAACCACCAGTCGTCCCAGTTAGACCACCTTATGTGCCAAAGCCACCCATTGTTTACCCTCCTGTTATTCCTGTGCCAGAACCAACACCCCCTACTGTGACGCCACCAAGCCCTCCAAGTGAAACACCATGCCCACCACCACCACCACCAGTGGTGCCATACCCTCCACCAGCACAACCAACATGTCCCATTGACTCTCTAAAACTGGGAGCATGTGTGGATGTGCTCGGTGGCCTCATCCACATAGGTATTGGAAGCAGTGCTAAACAGACATGTTGTCCAGTTCTTGCAGGGCTTGTGGACTTGGATGCTGCAGTGTGCCTCTGCACAACCATTAGGGCCAAGATCCTTAACATCAACATCATAATCCCCATTGCTCTTCAGCTTCTCATTGACTGTGGCAAGACTCCACCAGATGGATTCAAGTGTGCAGATAGTTAG 999 0.5135 MGKFALPNLLLFLLFNFTTLLNVLACPYCPYPSPKPPKHHPIVKPPPVHKPPKPCPPPHSSPKPPHVNPPYVPKPPHYPKPPVHPHPPYVPKPHPKPPLHPHPPYVPLPPVVKPPPYVPKPPYVPNPPVVTPPYIPKPPVVTPPYIPKPPVVPVIPPYIPKPPVVPVTPPYIPKPPVVPVTPPYVPKPPVVPVRPPYVPKPPIVYPPVIPVPEPTPPTVTPPSPPSETPCPPPPPPVVPYPPPAQPTCPIDSLKLGACVDVLGGLIHIGIGSSAKQTCCPVLAGLVDLDAAVCLCTTIRAKILNINIIIPIALQLLIDCGKTPPDGFKCADS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0037 332 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 250 330 IPR036312 -
Pvu6g0037 332 PRINTS Proline rich extensin signature 25 46 - -
Pvu6g0037 332 PRINTS Proline rich extensin signature 50 66 - -
Pvu6g0037 332 PRINTS Proline rich extensin signature 72 89 - -
Pvu6g0037 332 PRINTS Proline rich extensin signature 91 116 - -
Pvu6g0037 332 MobiDBLite consensus disorder prediction 216 236 - -
Pvu6g0037 332 MobiDBLite consensus disorder prediction 40 73 - -
Pvu6g0037 332 CDD HPS_like 247 329 IPR027923 -
Pvu6g0037 332 PANTHER - 1 330 - -
Pvu6g0037 332 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 1 330 - -
Pvu6g0037 332 Pfam Hydrophobic seed protein 247 330 IPR027923 -
Pvu6g0037 332 Gene3D - 245 331 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0037 Pvu-Chr6 1376123 1378343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0037 241 329 Acyl Lipid Metabolism Gene Families AT4G22520 36.957 2.33e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0037 - - gmx:100792715 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g0037 6 1376123 1378343 Pvu6g0037 6 1376123 1378343 ECH