Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1863 ATGGATAACAATAATTGGAGACCTAATCAAGGTACTGAAGCCAATATGGATACTAGTGATTGGAGAGGTGGACTGCAGCAAGAGTCGCGCCAAAGAATTGTCAACAAAATAATGGACACGTTAAAAAGACATCTTCCTGTTTCTGGTCAAGAGGGATTGCATGAACTTCAGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCTGCCACAAGCCAGTCTGATTATCTACGGAAAATATCTTTGAAGATGCTTACAATGGAGACTAAATCCCAAGGCACCATGGCCAACCCTCCAAACCAAGGTGGTCCAAGTAATAAACCTCCCGATCCAGGACTTGTTATTCCACCCCAAGTTCACAATCCTGGGCAGCAACATTCTATTCCTATGCCCAATCAATCTCAGGCACGCCAACAGCTTATTCAAAATAATATTGCATCTCAATCATCGGGTTTAACCCAGACTCCAATCCAAAATGTTGGCCAGAATAATCCCAATATGCAGAATATGCCTGGACAGAATTCAGTGGGAAACACCATTAACCAAAATTCCAACATGCAAAATATGTTTGCTGGTTCCCAGAGACAAATTCAAGCAAGGCAGCAGGTTGTTCCCCAACAACAGCAGCAATCACAAAATCCGCAACAATATCTGTACCAACAACAAATTCAACAACAGCTTTTGAGGCAGAAGTTCCATCAGCAGCAACAACAGCAGCAGCAGCAACAACAACAACAACAGCAGCAGAGTCTTCTACAACCAAATCAGTTGCAATCTTCTCAACAACCTGTCATTCAAACATCATCTGTTATGCAGCAGAATCCCATGATGCAGACATCTCTACCTAGCATCCAGCACAATCAACAATCAAATAATGTTCAACAATCAACACAGTCCGTCCTTCAGCAACACTCCCAAGTTCTAAGGCAACAGCAACCACAACAAAATTCGATCATTCATCAGCAACAAACACCAATTGGTCAACAGTCAATATTACCTCCACAACAGCAACAACAGCAACAACAGCAACAACAGCAGCAACAACAACAACTTATGGGGGCACAGGGAAATGCAACAAACATGCAGCATGCCCAAATACATGGGACACAGAATAATGTTGGTGATTTGCAGCAACCACAGAGGTTACTTGCACAACAGAATAACCTCTCCAACCTGCAACAGCAACAATTAATAAATCAACAAAACAGCCTATCGAATATGCATCAACAGTTGGGTAATAATGTCTCTGGGTTACAGCAACAGCAGGTCCTAGGACCTCAATCTGGCAACTCAGGTATGCAAACAAGCCAGCACTCTGCACACGTGCTACAACAATCACAGGTCCAAATTCAACCACAATCTCAGCAAAATGCATCAAATTTGTTACCATCTCAAGGGCAGCAGTCACAGTCTCTGGCTTCACAGCAGCAGTTGATGCCACAGATTCAATCTCAGCCTGCACAATTGCAACAACAGTTGGGTTTGCAACAGCAGCCAAATTCCTTGCAACGAGATATGCAACAAAGGCTTCAGGCCTCAGGTCCCTTACTTCAACAATCAAATGTTCTTGATCAGCAGAAGCAGTTATATCAATCACAGAGACCCCTTCCAGAAACTTCATCAACTTCTCTGGATTCAACAGCACAGACTGGACAGTCAAGTGGGGGTGATTGGCAAGAAGAAGTTTATCAAAAGATTAAATCAATGAAAGAAAGTTACTTGCCAGAGTTGAATGAAATGTACCAAAAGATTACTTCTAGACTTCAACAGCACGATTCTCTTTCACAACAACCAAAGTCAGAACAGCTCGATAAGCTGAAGGTGTTTAAAATGATGCTGGAACGAATTATAACATTCCTTCAGGTTTCCAAGAGTAACATCTCAGCTAGTTTCAAGGAGAAACTGGGTTCATATGAGAAGCAGATTATTAATTTTATAAATACAAATAGACCTAAGAAAAACTTGCCTGGACAGCTTCCCCCACCACATATGCATTCCATGTCACAGTCACAACCCCAAGTTACACAAGTGCAGTCTCATGAAAATCAAATGAATTCTCAGTTGCAAGCAGCAAATATGCAAGGCTCTGTAGCAACAATGCAGCAGAATAATATGGCAAACATGCAACATAATTCTCTGTCTGGTGTATCTACAGCACAGCAGAGTAAGATGAATTCAATGCAACCAAATACCAATTTGGATTCAGGACTAGGAAATGCTGTAAACTCCATACAACAGGTTGCAGTGAGCTCACTCCAACAAAACCCTGCTAGTGCTCCTCAACAAACTAATGTTAACTCCTTGTCTTCACAATCTGGGGTTAGTGTAATCCAGCCAAATCTTAATCCCCTTCAGCAAGGTTCTAGTATGCTTCAACACCAGCAACTAAAACAACAGGAGCAACAGATGTTACAGAATCAACAGCTTAAGCAACAATATCAGCGGCAATTGATGCAGAGGAAGCAACAGCAGATCATGCAACAGCAGCAGCAGCAATTACACCAGACAGCAAAGCAACAGCTGCCTGCACAATTGCCAACTCATCAAATACAACAACTTCACCAAATGAATGATGCAAATGACATTAAGATGAGGCAAGGAATTGGAGTTAAGCCAGGGGTCTTTCAGCAACATCTTACATCCAGTCAACGTTCAGCTTATCCCCATCAACAGATGAAAGGGAGTCCTTTTCCTGGTTCTTCTCCCCAACTCCAGGCCACATCTCCTCAGATTCCGCAACACTCATCTCCTCAGGTTGACCAGCAAAACCACCTTCCATCTCTCACAAAAGTTGCTACACCTCTGCAATCTGCTAACTCACCTTTTGTAGTACCCACTCCCTCACCTCCCTTGGCTCCATCTCCTATGCCAGGGGATTCTGAAAAGCCCATTTCTGGCGTTTCATTGATATCAAATGCTGCAAATATTGGATATCAACAATCAGGGGGTGCAACAGCACCTGCTCAATCCCTTGCCATTGGAACACCTGGAATATCAGCCTCTCCTTTACTTGCAGAGTTCACTGGTCCTGATGGTGCTCTTGGTAATGCATTTGTATCCACATCTGGAAAGTCGACTGTTCCTGAACAGCCTATTGAGCGTCTAATTAAAGCGGTGAAATCAATGTCATCAAAAACATTATGTTCTGCTGTTAGTGATATTGGTTCAGTTGTAAGCATGAACGATAGGATAGCAGGATCAGCACCAGGTAATGGATCCAGAGCTGCTGTGGGTGAAGATTTGGTCGCTATGACTAATTGTCGCCTTCAGGCAAGAAATTTTATCACACAAGATGGTGCCAATGGAACTAGGAGGATGAAGCGCTACACTTATGCTACACCCTTGAATGTTGTATCTTCTGCTGGTAGCATGAATGATAGTATCAAGCAGTTAGCTGCTACTGAGGTCTCTGATTTGGATTCAACTGCAACATCTAGATTCAAGATGCCAAGGGTTGAGGCTAATCATTCCCTTTTGGAAGAAATTAGGGAGGTTAATCAACGACTTATTGACACAGTAGTAGACATAAGCAATGAAGAAGTTGATCCAACAGCAGCAGCAGCTGCGGCTGAAGGGACAGAAGGGACCATTGTCAAGTGTTCTTACAATGCTGTAGCTCTCAGTCCGAGCTTAAAATCCCAGTATGCTTCAGTACAGATGTCACCAATTCAACCCTTGCGCTTGCTTGTTCCCACGAATTATCCTAACTGTTCCCCCATACTCCTCGACAAGTTTCCAGTTGAATCTGGTAAGGAGAATGAAGATCTTTCTGTGAAAGCAAAGTCAAGGTTTAGCATATCCTTACGAAGTCTGTCACAACCTATGTCCCTTGGGGAGATAGCAAGGACTTGGGATGTTTGTGCTCGCACTGTTATTTCTGAGCATGCACAGCAAAGCGGTGGTGGGAGTTTCAGCTCCAAGTATGGGACTTGGGAGAATTGCTTGACCACATAA 3957 0.4306 MDNNNWRPNQGTEANMDTSDWRGGLQQESRQRIVNKIMDTLKRHLPVSGQEGLHELQKIAQRFEEKIFTAATSQSDYLRKISLKMLTMETKSQGTMANPPNQGGPSNKPPDPGLVIPPQVHNPGQQHSIPMPNQSQARQQLIQNNIASQSSGLTQTPIQNVGQNNPNMQNMPGQNSVGNTINQNSNMQNMFAGSQRQIQARQQVVPQQQQQSQNPQQYLYQQQIQQQLLRQKFHQQQQQQQQQQQQQQQQSLLQPNQLQSSQQPVIQTSSVMQQNPMMQTSLPSIQHNQQSNNVQQSTQSVLQQHSQVLRQQQPQQNSIIHQQQTPIGQQSILPPQQQQQQQQQQQQQQQQLMGAQGNATNMQHAQIHGTQNNVGDLQQPQRLLAQQNNLSNLQQQQLINQQNSLSNMHQQLGNNVSGLQQQQVLGPQSGNSGMQTSQHSAHVLQQSQVQIQPQSQQNASNLLPSQGQQSQSLASQQQLMPQIQSQPAQLQQQLGLQQQPNSLQRDMQQRLQASGPLLQQSNVLDQQKQLYQSQRPLPETSSTSLDSTAQTGQSSGGDWQEEVYQKIKSMKESYLPELNEMYQKITSRLQQHDSLSQQPKSEQLDKLKVFKMMLERIITFLQVSKSNISASFKEKLGSYEKQIINFINTNRPKKNLPGQLPPPHMHSMSQSQPQVTQVQSHENQMNSQLQAANMQGSVATMQQNNMANMQHNSLSGVSTAQQSKMNSMQPNTNLDSGLGNAVNSIQQVAVSSLQQNPASAPQQTNVNSLSSQSGVSVIQPNLNPLQQGSSMLQHQQLKQQEQQMLQNQQLKQQYQRQLMQRKQQQIMQQQQQQLHQTAKQQLPAQLPTHQIQQLHQMNDANDIKMRQGIGVKPGVFQQHLTSSQRSAYPHQQMKGSPFPGSSPQLQATSPQIPQHSSPQVDQQNHLPSLTKVATPLQSANSPFVVPTPSPPLAPSPMPGDSEKPISGVSLISNAANIGYQQSGGATAPAQSLAIGTPGISASPLLAEFTGPDGALGNAFVSTSGKSTVPEQPIERLIKAVKSMSSKTLCSAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFITQDGANGTRRMKRYTYATPLNVVSSAGSMNDSIKQLAATEVSDLDSTATSRFKMPRVEANHSLLEEIREVNQRLIDTVVDISNEEVDPTAAAAAAEGTEGTIVKCSYNAVALSPSLKSQYASVQMSPIQPLRLLVPTNYPNCSPILLDKFPVESGKENEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCARTVISEHAQQSGGGSFSSKYGTWENCLTT* 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1863 1318 Coils Coil 797 817 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 938 962 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 155 185 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 532 559 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 753 772 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 650 672 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 92 138 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 121 138 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 424 508 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 1 23 - -
Pvu5g1863 1318 Gene3D Coactivator CBP, KIX domain 20 98 IPR036529 GO:0003712|GO:0006355
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 103 117 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 944 958 - -
Pvu5g1863 1318 Pfam KIX domain 19 97 IPR036546 -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 285 359 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 713 739 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 779 798 - -
Pvu5g1863 1318 Coils Coil 1160 1180 - -
Pvu5g1863 1318 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 856 1318 - -
Pvu5g1863 1318 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 750 - -
Pvu5g1863 1318 MobiDBLite consensus disorder prediction 881 924 - -
Pvu5g1863 1318 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 856 1318 IPR044661 GO:0003713|GO:0031490
Pvu5g1863 1318 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 750 IPR044661 GO:0003713|GO:0031490
Pvu5g1863 1318 SUPERFAMILY Kix domain of CBP (creb binding protein) 18 91 IPR036529 GO:0003712|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1863 Pvu-Chr5 40208002 40220520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1863 K14972 - gmx:100783762 1566.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1863 5 40208002 40220520 Pvu10g1637 10 42642189 42646068 PCT