Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1837 ATGGCACCACAAGGCAGCAGAACCTACAAACTACATGGACTCCAACTTGCACTCATTCTAACCTTCTTTCTCTTTCTCATTGTTCTACTTCCTCATTCAGGTGGATCTGTGTTGTCTGATAGAAGAAAGAGTTTGGAAGAAGAGAAAGTGGGGATAGGGTCAAAGCCTCCAGCTTGTGGAAACAAGTGCATGAACTGTAGGCCTTGCACAGCAACTGTGGTGGTTCCTGATCACAAGAACAAGAAGAAGGGTTTCATGGAAGATGATAACTATTACCTCCTTTCATGGAAATGCAGATGTGGGGATAAGTTCTTTCAACCATAA 324 0.4321 MAPQGSRTYKLHGLQLALILTFFLFLIVLLPHSGGSVLSDRRKSLEEEKVGIGSKPPACGNKCMNCRPCTATVVVPDHKNKKKGFMEDDNYYLLSWKCRCGDKFFQP* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1837 107 Pfam Epidermal patterning factor proteins 52 107 - -
Pvu5g1837 107 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 6 107 IPR039455 GO:0010374
Pvu5g1837 107 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1837 Pvu-Chr5 40043780 40044336 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1837 - - pvu:PHAVU_005G177700g 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1837 5 40043780 40044336 Pvu10g1612 10 42432379 42433124 PCT