Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1721 ATGGCACCCAATGGAGAGTGTTTGCCTTGTTCATTCTCTAGGAACAGCAACACCAACAACAACATGTGCAAACCTCCGAGGCATTCATCTGATCACATTCAAAGAACAGTCTCAGACATCTCGTTTTTTGAGCTAACCAAGGAAGGGACTGATTTGTCACTTCCAGCTATAACTGAGGTTATGGATGCAAAGTGTGAGTGCTGTGGAATGTGCGAGGAGTGTACTCCTGAGTACATAGAGCGTGTGCGTGAGAAGTTCTTGGGGAAGTGGGTGTGTGGTTTGTGTGCTGAGGCAGTGAAGGAAGAGTTGGAGAAAAATGGTGGGAAGAAAGAAGAGGCATTGAGTTCACACATGAGTGCATGTGTGAGGTTCAACAAATATGGGAGGGCTTTCCCAGTTCTGTTCCAAGCAGAAGCCATGAAGGAGATGCTAAAGAAGAACAAAATGGAAGGGAGAAGGGCCAAGTCCTTCAACCCAAGGGACAAAGGAGGACAAAGCAAAGGAGGGATTGCTAGAAGTTCAAGCTGCATTCCAGCTATCACAAGAGAGATGAATGGTCTCACAATGGCCAATTAG 576 0.4635 MAPNGECLPCSFSRNSNTNNNMCKPPRHSSDHIQRTVSDISFFELTKEGTDLSLPAITEVMDAKCECCGMCEECTPEYIERVREKFLGKWVCGLCAEAVKEELEKNGGKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKMEGRRAKSFNPRDKGGQSKGGIARSSSCIPAITREMNGLTMAN* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1721 191 PANTHER OS01G0745000 PROTEIN 3 188 IPR012876 -
Pvu5g1721 191 MobiDBLite consensus disorder prediction 150 172 - -
Pvu5g1721 191 PANTHER CASP-LIKE PROTEIN (DUF1677) 3 188 - -
Pvu5g1721 191 Pfam Protein of unknown function (DUF1677) 60 146 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1721 Pvu-Chr5 39175998 39176573 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1721 - - gmx:100785884 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1721 5 39175998 39176573 Pvu5g1721 5 39175998 39176573 ECH
Pvu5g1721 5 39175998 39176573 Pvu10g1518 10 41732609 41734113 PCT