Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1719 ATGAAGACTTCAATGGATTTCCGAGCCCCGCCGCCATCTCCCGTGGCCTCTGCCAGGCGAACCTCCTCGCTCTCCAACGACGACGTTTTCCGCCGATTCTTGGAGACCTCTCTCCGTCTCCCAAGCATCAACAACCACCACCAAAAGCCACTTCCAAAGGTTGACTTTCGCTCCTTATGCTCCGACGACGCTCTTCGTCACGTCATTTCGGACTCTTTCACTGCTGTCGGGTGCTTCCAGCTGCTCAACCATGGGATTCCACTGGACGTGATCGCGTCGCCGGCGGAAGCTTCCATCGCAATTTTCCAGGTGCCGCCGGAGAAGCGAGGCGGCGCGACGAGGTCAGCGGAGAGTCCGTGGGGTTTCGAGGAAGATGATGAGTTCGTGTGGGGAAGAGATAAGGAGTTCAACCTCAGAATGCAGCGAATTTCGCCAACCGGATATTCCAATTTCAATAAGAAGATGGAGAATCTTGTGGCCAGGATAGAGAAGGTGGCGGAGAAAATTTTGCAAGTGATATTCGATGATTCTCCCCATAAAGTTGCAAACTCTGTGGACATGATTGGTGGGACGCTTTGTTCTGTTTATAAGCACTGCTCTGCTAAGATGTCAGGAGAATGTGGTAACTCTGTGATTAGGATGCTGATTAGAGGAAACCAATACTCTCATTGCTTGTGCTTGCATCTATGTGACGGATCTTCTGAGTTTCAGGTTTACTCTAAGAAAGGTTGGCTCTCTTTCTTCCCAGAAAAAGGAGCCCTTGTAATCACCGCTGGAGACCAAACTCAGATGTTGAGTGATGGGCACTACAAGCAGGTGATTGGGAGGCCAATATTTGAAGGTGAGAAAGAGGACTACATTTCAATGGCTTTCCTCTATTCTCTGCCAAACAACAAGAACAATTTCCAAAAGAGTAGAGAAAGAACTATTTCACTGGGCTTGCAGCTCATATTGGCTATGATTCTGACTCTTCTGTACCATGTCCTGATTTTTGTCTACAATTTTTTTTGA 1011 0.4827 MKTSMDFRAPPPSPVASARRTSSLSNDDVFRRFLETSLRLPSINNHHQKPLPKVDFRSLCSDDALRHVISDSFTAVGCFQLLNHGIPLDVIASPAEASIAIFQVPPEKRGGATRSAESPWGFEEDDEFVWGRDKEFNLRMQRISPTGYSNFNKKMENLVARIEKVAEKILQVIFDDSPHKVANSVDMIGGTLCSVYKHCSAKMSGECGNSVIRMLIRGNQYSHCLCLHLCDGSSEFQVYSKKGWLSFFPEKGALVITAGDQTQMLSDGHYKQVIGRPIFEGEKEDYISMAFLYSLPNNKNNFQKSRERTISLGLQLILAMILTLLYHVLIFVYNFF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1719 336 SUPERFAMILY Clavaminate synthase-like 31 299 - -
Pvu5g1719 336 Coils Coil 148 168 - -
Pvu5g1719 336 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 335 - -
Pvu5g1719 336 MobiDBLite consensus disorder prediction 1 22 - -
Pvu5g1719 336 Gene3D - 22 311 IPR027443 -
Pvu5g1719 336 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 114 IPR026992 -
Pvu5g1719 336 PANTHER - 5 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1719 Pvu-Chr5 39155494 39157410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1719 - - pvu:PHAVU_005G166600g 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1719 5 39155494 39157410 Pvu5g1719 5 39155494 39157410 ECH
Pvu5g1719 5 39155494 39157410 Pvu10g1514 10 41694479 41696679 PCT