Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1718 ATGGAGGGTGGGAATCTAAGCAGAAGCATAAGTAGGAGCTTGAGCAGATCAAGTTGGAGAATGGAGGGTGTGTTTGCGAGTGGAAGATATTCACGAAGAGCTTCAAATATTGATGAGGATGAAGAGGCTCTCAAGTGGGCAGCCATAGAGAGATTGCCAACCTATGACAGGCTAAGAACAAGCATCCTTCAAACTTTTTCGGAGGTTCCAAACTCATTGGAACACAGAGAAGTCGATGTTAGAAAGTTAGATGGGAACGAAAGGCAAGAGTTCATTGACAGAATCTTCAAGGTTGCTGAAGAAGACAATGAAAAGTACTTGAGCAAGTTCAGAAACAGACTTGAAAAGGTTGGTATCCGACTCCCAACAGTAGAAGTGAGGTTTCAGAATTTGACAGTTGAGGCTGATTCCTACATTGGCAGCAGAGCTCTGCCAACTCTACCAAACGTTGCATTGAACATTGCTGAATCAGCTCTTGGCTTATTTGGGATTAGTACAGCAAAGAGAACAAAGCTCACAATTCTTAAAAATGTCTCCGGCATTATTAAACCTTCTAGGATGGCCCTTTTGCTTGGCCCCCCTTCATCAGGGAAAACGACCCTTTTGCTGGCATTGGCTGGAAAATTGGACAATGATTTGAGGGTACGAGGAGAAATCTCCTACAACGGGTACAAGCTTAATGAGTTTGTACCTAGAAAGACTTCAGCCTACATCAGCCAAAATGATGTGCATATTGGAGAAATGACAGTAAAAGAAACCCTCGATTTCTCAGCTAGATGTCAAGGAGTAGGAACACGATATGACCTATTAGCCGAGCTTGCTCGAAGGGAAAAAGAAGCTGGAATATTTCCGGAGGCAGAACTTGACCTTTTCATGAAGGCTACTGCAATCGAGGGAACAGAGAGCAGTCTCATCACTGACTATACTCTCAAAATACTGGGGCTTGATATCTGCAAAGATACCATCGTGGGTGATGAAATGCACAGAGGAGTGTCTGGTGGCCAAAAGAAGCGTGTAACCACAGGAGAAATGATTGTTGGGCCCACTAAAACATTGCTGATGGATGAGATATCAACGGGCCTTGATAGCTCCACGACGTATCAAATAGTAAAATGCTTCCAACAAATCGTGCACCTTACGGAAGCAACCATATTCATGTCCCTACTCCAACCCGCTCCGGAGACGTTCGATCTCTTTGATGATATCATCTTGATATCGGAGGGTCAGATTGTTTATCAGGGCCCACGCGAGCACATCATTGAGTTCTTTGAATCCTGTGGATTTAGATGTCCTGAAAGAAAGGGAACCGCAGATTTCTTACAGGAGGTTACTTCAAGAAAAGACCAAGAACAATATTGGATAAATAGAAGCATACCATACCATTACATTACAGTGAGCGAGTTTGCAAATAGATTCAAGCAATTCCATGTTGGAATGCAACTTGGGAGTGAACTCTCTGTGGCATTTGACAAATCAAGGGGACATAGAGCATCTCTTGTTTTCAAGAAATATACAGTGCCCACAATGGGACTTCTTAAAGCATGTTGGGATAAGGAATGGCTACTAATCAAGAGGAACTCTTTTGTGTATATATTCAAGACAGCTCAAATATGCATTATTGGTATCATAGCTGCAACTGTGTTCTTTAGGACCAAAATGCATCAAAGGGATGAGGCTGATGCAGCAGTTTACATAGGTGCAATTTTGTTTACCATGATCATGAACATGTTCAATGGTTTTTCTGAATTGCCACTCACCATTGCAAGACTTCCCGTGTTCTACAAGCATAGAGACCACCTTTTCCATCCTCCTTGGACTTATACACTCCCTAATTTCTTACTACGAATCCCCATTTCTATCTTTGAGGCTACTGTTTGGGTGCTTCTCACATACTATCCTATAGGATTTGCACCTGAAGCTAGCAGGTTTTTCAAGCACTTGTTGTTAGTTTTTCTTATCCAACAAATGGCAGCTGGGATGTTTAGGCTCATATCTGGAGTTTGTAGGACAATGATTATTGCTAACACTGGTGGAGCCCTCATGCTGCTTCTTGTTTTTCTACTTGGAGGTTTTATCCTTCCTAAACGTGACATTCGAGATTGGTGGATTTGGGGTTACTGGATTTCACCATTAAATTATGCGTACAATGCTTTGACTGTGAACGAACTATTTGCTCCAAGGTGGAGCAATGTGTCTTCAGATGGTGTAACCCCAATCGGTATTGCTACATTAAATAACTTTGACATTTTTGCTGAGAAAGAATGGTACTGGATAGGTGCAGCTACTCTCTTCGGCTTCACTGTTCTGTACAATGTTCTCTTCACCTTTGCACTCATGTACCTTAACCCTATTGGAAAAAAACAAGCAATAATATCTGAAGAAGAAGCAACCGAAATGGAAACTGGAGGAAACTCTAGGGAAGAGCCAAGACTTGTAAGGCCAGAGCCCAACAGAGAGATTGCTCCTCAGCCATTATCTTCTACTGATGGAAACAACACACGAGAAGTGGCAATGCAACAAATGAGTAGCCGAGGTCAAATGAGAAATGTTGATTCAATGCGTGAATCAACCATTGGTGTTTCCCCAAAGAAAGGAATGGTTCTGCCTTTTCAACCACTTGCAATGTCTTTTGATAGTGTTAATTATTATGTGGACATGCCTGCTGAAATGAAAGAGCAAGGAGTGACAGAAGATAGACTACAGCTACTTAGGGAAGTAACTGGTGCCTTTAGGCCTGGTGTTTTAACTGCTTTAATGGGAGTCAGTGGAGCTGGAAAGACAACTTTGATGGATGTTTTAGCTGGGAGAAAGACAGGTGGCTACATTGAAGGAGATGTTAGAATATCAGGCTTCCCAAAGAATCAAGAAACATTTGCAAGAATTTCTGGCTACTGTGAGCAGACAGATATTCATTCACCCCAAGTTACCATTCGAGAATCTTTGATCTATTCTGCTTTCCTTCGGTTACCTAGAGAGGTCAATAATGAGGAAAAAATGAAATTTGTTGATGAAGTAATGGACTTGGTCGAGCTAAACAATCTCAAGGATGCTATAGTTGGGCTTCCAGGTGTTACGGGGCTGTCTACCGAACAAAGAAAAAGACTAACAATTGCTGTTGAACTTGTTGCCAATCCTTCAATCATTTTCATGGATGAACCCACTTCAGGTCTCGATGCAAGAGCAGCAGCCATTGTGATGAGGACTGTGAGAAACACTGTTGACACTGGAAGAACAGTTGTATGCACAATTCACCAACCTAGTATTGATATCTTTGAGGCTTTTGACGAGTTGTTGTTGATGAAGAGAGGAGGCCAAGTGATATACTCAGGACCATTGGGAAGGAATTCACACAAGATCATAGAATATTTTGAGGCAATCCCGGGGGTCCCAAAAATTAAGGATAAGTACAACCCAGCAACATGGATGTTAGAGGTAAGCTCTATAGCAGCTGAAGTTCGACTTGGAATGGATTTTGCTGAGTACTACAAATCATCATCTTTATACCAGCGAAACAAAGCTCTTATAAGGGAGCTAAGTGCACCTCCTCCAGGAGCAAAAGATTTGTACTTCCCCACTCAGTATTCTCAATCCACTTGGGAACAATTCAAATCTTGTTTGTGGAAGCAATGGTTGACTTATTGGAGAAGTCCAGATTATAACCTTGTCAGATTTTTCTTCACCTTAGCGGTAGCTCTAGTGGTGGGGACAGTATTTTGGAGGGTTGGCGAAAAAAGGGGAAGCTCAAGCGATTTGAACACTATTATAGGAGCTCTATATGGATCTATATTTTTTGTTGGTGTTAACAATTGTCAAACTGTGCAACCAGTAGTGGCCGTTGAAAGAACAGTGTTTTATAGAGAAAGAGCTGCTGGAATGTATTCTGCTTTGCCTTATGCCATTGCACAGGTTATTTCAGAAATACCATATGTATTTGTTCAAACTATTTACTTTGCATTCGTAGTCTATGCTATGGTGAGCTTTGAATGGAAAGTGGCAAAGGTCCTTTGGTTTTTCTTTGTTAGTTTTTTCTCCTTCTTGTACTTCACATACTATGGGATGATGACTGTTTCCATTACACCAAACCACCAAGTGGCATCAATCTTTGGAGCAGCATTCTATGGACTCTTCAATCTCTTTTCTGGTTTCTTTATCCCAAGACCAAAAATTCCAGCATGGTGGGTTTGGTACTATTGGATTTGCCCAGTAGCATGGACAGTATATGGGTTAATTGTCTCTCAGTATAGAGATGTAGAGATAGACATTATTGTGCCTGGTGGGAGTAATCAAACTATCAAGCACTATATTGAAGACCATTATGGGTTTAAACCGGACTTCATGGGACCAGTTGCCATTGTTTTGGTCGCTTTTCCAGTCTTCTTTGCCTTTGTATTTGCCTTCTCCATCAAAACATTAAACTTCCAAACCAGATAA 4431 0.4155 MEGGNLSRSISRSLSRSSWRMEGVFASGRYSRRASNIDEDEEALKWAAIERLPTYDRLRTSILQTFSEVPNSLEHREVDVRKLDGNERQEFIDRIFKVAEEDNEKYLSKFRNRLEKVGIRLPTVEVRFQNLTVEADSYIGSRALPTLPNVALNIAESALGLFGISTAKRTKLTILKNVSGIIKPSRMALLLGPPSSGKTTLLLALAGKLDNDLRVRGEISYNGYKLNEFVPRKTSAYISQNDVHIGEMTVKETLDFSARCQGVGTRYDLLAELARREKEAGIFPEAELDLFMKATAIEGTESSLITDYTLKILGLDICKDTIVGDEMHRGVSGGQKKRVTTGEMIVGPTKTLLMDEISTGLDSSTTYQIVKCFQQIVHLTEATIFMSLLQPAPETFDLFDDIILISEGQIVYQGPREHIIEFFESCGFRCPERKGTADFLQEVTSRKDQEQYWINRSIPYHYITVSEFANRFKQFHVGMQLGSELSVAFDKSRGHRASLVFKKYTVPTMGLLKACWDKEWLLIKRNSFVYIFKTAQICIIGIIAATVFFRTKMHQRDEADAAVYIGAILFTMIMNMFNGFSELPLTIARLPVFYKHRDHLFHPPWTYTLPNFLLRIPISIFEATVWVLLTYYPIGFAPEASRFFKHLLLVFLIQQMAAGMFRLISGVCRTMIIANTGGALMLLLVFLLGGFILPKRDIRDWWIWGYWISPLNYAYNALTVNELFAPRWSNVSSDGVTPIGIATLNNFDIFAEKEWYWIGAATLFGFTVLYNVLFTFALMYLNPIGKKQAIISEEEATEMETGGNSREEPRLVRPEPNREIAPQPLSSTDGNNTREVAMQQMSSRGQMRNVDSMRESTIGVSPKKGMVLPFQPLAMSFDSVNYYVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDVRISGFPKNQETFARISGYCEQTDIHSPQVTIRESLIYSAFLRLPREVNNEEKMKFVDEVMDLVELNNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKDKYNPATWMLEVSSIAAEVRLGMDFAEYYKSSSLYQRNKALIRELSAPPPGAKDLYFPTQYSQSTWEQFKSCLWKQWLTYWRSPDYNLVRFFFTLAVALVVGTVFWRVGEKRGSSSDLNTIIGALYGSIFFVGVNNCQTVQPVVAVERTVFYRERAAGMYSALPYAIAQVISEIPYVFVQTIYFAFVVYAMVSFEWKVAKVLWFFFVSFFSFLYFTYYGMMTVSITPNHQVASIFGAAFYGLFNLFSGFFIPRPKIPAWWVWYYWICPVAWTVYGLIVSQYRDVEIDIIVPGGSNQTIKHYIEDHYGFKPDFMGPVAIVLVAFPVFFAFVFAFSIKTLNFQTR* 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1718 1476 CDD ABCG_PDR_domain2 872 1110 IPR034003 -
Pvu5g1718 1476 Pfam ABC-2 type transporter 390 443 IPR043926 GO:0140359
Pvu5g1718 1476 Pfam ABC-2 type transporter 1084 1145 IPR043926 GO:0140359
Pvu5g1718 1476 Pfam ABC-transporter N-terminal 86 150 IPR029481 -
Pvu5g1718 1476 CDD ABCG_PDR_domain1 168 414 IPR034001 -
Pvu5g1718 1476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 159 432 IPR003439 GO:0005524
Pvu5g1718 1476 Pfam ABC-2 type transporter 1200 1414 IPR013525 GO:0016020|GO:0140359
Pvu5g1718 1476 Pfam ABC-2 type transporter 512 723 IPR013525 GO:0016020|GO:0140359
Pvu5g1718 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 896 1112 IPR027417 -
Pvu5g1718 1476 MobiDBLite consensus disorder prediction 796 815 - -
Pvu5g1718 1476 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1476 - -
Pvu5g1718 1476 Gene3D - 889 1122 IPR027417 -
Pvu5g1718 1476 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 1476 - -
Pvu5g1718 1476 Pfam ABC transporter 903 1055 IPR003439 GO:0005524
Pvu5g1718 1476 Pfam ABC transporter 175 357 IPR003439 GO:0005524
Pvu5g1718 1476 Pfam Plant PDR ABC transporter associated 728 791 IPR013581 -
Pvu5g1718 1476 Gene3D - 162 466 IPR027417 -
Pvu5g1718 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 432 IPR027417 -
Pvu5g1718 1476 SMART AAA_5 184 409 IPR003593 -
Pvu5g1718 1476 SMART AAA_5 912 1104 IPR003593 -
Pvu5g1718 1476 MobiDBLite consensus disorder prediction 796 831 - -
Pvu5g1718 1476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 875 1128 IPR003439 GO:0005524
Pvu5g1718 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 213 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1718 Pvu-Chr5 39139088 39148890 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1718 K08711 - gmx:100801386 2648.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1718 5 39139088 39148890 Pvu10g1513 10 41672617 41682732 PCT