Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1705 GGAAATGGGAGATCCGTGGGAGCCTCTGGATTTGCTTCGCGAGGTTTATTCAGCTGGCTTACTGGGGAATCTTCCAGTTCTCTTCCTCCTCTGGATACCCCACTTAGAGGGTTTGCCCCGCCACCTTCACTGCCAGATTATGTTGAACCAGGAAAGACCAAGATCACAACTCTCTCCAATGGTCTAAAGATAGCATCAGAAACCTCACCAAACCCTGCTGCCTCAATAGGGTTATATGTTGACTGTGGTTCCCTCTATGAGACGCCATTGTTAAGCGGGGCATCACACCTGCTAGAGAAAATGGCTTTCAAGAGCACGACAAACAGAAGCCACTTTCGTGTTGTAAGGGAAGTGGAAGCAGTGGGTGGTAATGTAGGAGCCTCAGCCTCTCGGGATCAAATTGGCTATACTTTTGATGCTCTGAAAACCTATGTTCCACAAATGATTGAATTGTTGGTTGACTGTGTAAGGAATCCGGCCTTCTTGGATTGGGAGGTCAACGAAGAGCTTCGAAAGGTGAAAGCAGAGATAGGAGAGCTAACAAACAATCCCCAGCGCCTACTTATGGAGGCAGTTCACTCTGCTGGTTATTCCGGAGCATTGGCTATGCCACTTTTGGCTACTGAATCAGCACTGAACAGATTAAATGGCCCCATTTTAGAGGAATTTGTTGCCGAGAATTTTACTGCATCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCATCAAGAACTTCTATCCGTTGCTGAACCACTTCTCTCTGATCTACCAAGTGTTCCACATTCTGAAGAACCAAGTTCTACGTATGTTGGGGGTGATTTTCGTCGGCAAGGTGAATCAGGGGGTGCACATGTAGCTATTGCCTTTGAAGTGCCTGGTGGCTGGAAAAAAGAGAAAGAAGCTATTATTTTGACCGTTTTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCTGGGGGACCTGGCAAGGGAATGCACTCAAGGCTATATCTTCATGTCTTGAATGAATATCAACAGATTCAATGTTTTTCTGCATTCAACAGTCTCTTCAACAATACAGGGTTATTTGGCATATATGCAACCACAAGCTCTGATTTTGTGGAAAAAGCTGTGGACCTCGCAGCCAAAGAATTAATAGCACTCGCATCACCAGGACAAGTTTCACAGGTACAGCTTGACCGTGCCAAGGAATCCACGAAGTCTGCAATACTAATGAATTTAGAGTCTAGAATTATTGCATCAGAGGATATAGGAAGGCAGATACTGACTTATGGAGAAAGGAAGCCAGTGGAGCAGTTGTTAGAGGCAGTAGAGGCAATCACTTTGAATGATATCTCTGAATTTTCTCAGAAGATTATTTCCTCGCCTCTCACTATGGCATCCTATGGGGATGTTATGAATGTTCCCAGTTATGAATCAGTTAGCAGCAAGTTCCATGCAAAATGA 1449 0.4513 GNGRSVGASGFASRGLFSWLTGESSSSLPPLDTPLRGFAPPPSLPDYVEPGKTKITTLSNGLKIASETSPNPAASIGLYVDCGSLYETPLLSGASHLLEKMAFKSTTNRSHFRVVREVEAVGGNVGASASRDQIGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNEELRKVKAEIGELTNNPQRLLMEAVHSAGYSGALAMPLLATESALNRLNGPILEEFVAENFTASRMVLAASGVEHQELLSVAEPLLSDLPSVPHSEEPSSTYVGGDFRRQGESGGAHVAIAFEVPGGWKKEKEAIILTVLQMLMGGGGSFSAGGPGKGMHSRLYLHVLNEYQQIQCFSAFNSLFNNTGLFGIYATTSSDFVEKAVDLAAKELIALASPGQVSQVQLDRAKESTKSAILMNLESRIIASEDIGRQILTYGERKPVEQLLEAVEAITLNDISEFSQKIISSPLTMASYGDVMNVPSYESVSSKFHAK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1705 482 ProSitePatterns Insulinase family, zinc-binding region signature. 83 106 IPR001431 GO:0004222|GO:0006508
Pvu5g1705 482 Pfam Insulinase (Peptidase family M16) 64 208 IPR011765 -
Pvu5g1705 482 SUPERFAMILY LuxS/MPP-like metallohydrolase 280 473 IPR011249 GO:0046872
Pvu5g1705 482 Pfam Peptidase M16 inactive domain 220 398 IPR007863 -
Pvu5g1705 482 SUPERFAMILY LuxS/MPP-like metallohydrolase 51 260 IPR011249 GO:0046872
Pvu5g1705 482 Gene3D - 45 255 - -
Pvu5g1705 482 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 13 481 IPR037715 GO:0006627
Pvu5g1705 482 PANTHER METALLOPROTEASE 13 481 - -
Pvu5g1705 482 Gene3D - 262 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1705 Pvu-Chr5 39034128 39037629 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1705 K01412 - gmx:100810996 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1705 5 39034128 39037629 Pvu5g1705 5 39034128 39037629 ECH
Pvu5g1705 5 39034128 39037629 Pvu10g1497 10 41551479 41556831 PCT