Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1701 ATGGTGATCATACAGGAAAAGGGCGTGAAGCCTGTTCTGCTTAAATTTGGGTTGGCTTTGGCTCTTTCATTTGCTGGATTTCTCTACTCACGCTTCAGAATCAGAAGAATCAAGCCCTCCCAGTCACGCAAGGGAGGTTCTTTTGATCACGAGAGTGAAGTTAATTCAGGAGGAGGTATAGGGGCAGCACTAAGTACTTGCAACATCATTTCAGCAGCAAATTTTCTGTGTTCTGAAGAAACTTGCACCGACAGGGTGATAACTGGCAATTCTCCTCTTGTTCTCTCTCCTGACAGTACACAAAATGGTGATCCTCTTAAGGTCGTAGACTTTGGAGCCACAGTTGTCAGAAATTCTTTTAACAAAGATATGGAAGCACCGTGGTTAAAAGTATATGCAGATCCTGATAAGGATGACTACGAGCAAGAGGTAACTCAACTCAGGAATATGATTAGAATGCTTCAAGACAGGGAACAAAGTCTTGAGGTTCAACTGCTCGAGTACTGTGGTCTTAGAGAGCAAGAAACAGTAGTGATGGAGCTCCAAAATAGATTGAAAGCTAGTACTGTTGAGGTAAAGATGTTCAATCTGAAGGTTAAAACCTTGCAGTCTGAGAATTGGAGACTAAAGGAACAAGTTTCTGATCATGCAAAAGTGCTGGCTGAGCTTGAGAGTGCAAAAGCACAAGTCAAATTGCTTAATGAGAAAATTAGGTATGAAGCTGAACAGAATAGGGAACAGATCGTAAGTCTTCAACAGAAAGTTTCCAGGTTGCAAGACCAACAATGCAAGGATGCTGCTTGTGATCAGGACATTCAAATAAAGCTGCAAAAGCTGAAGGATCTGGAGTCTGAAGCAGAAGAGTTGAGGAAATCTAATTTAAGATTGCATATAGAAAATTCTCACTTAGTTCGAAGATTGGATTCTACCCAAATCCTTGCTAATGCAGTTCTGGAAGACCCAGAGGTAGATGCTGTGAAGCAAGAAAGTGAGTGTCTTAAACAAGAAAACGTGCGCTTGATGAAGGAAATTGAGCAACTACATTCTGATCGATGTTCAGATCTTGAAGAATTAGTTTATATGCGGTGGATAAATGCTTGCTTACGATATGAACTAAGAAATTTTGAAGCCCCACCAGGTAAAATGGTTGCAAAGGACTTAAGCAGAAGCTTAAGCCCCACGTCTGAGAGGAAAGCCAAGCAGCTTATACTTGAATACGCAAATACTGATGGACCAGGGAACACTGTGGACTTTGATATAGATCAATGGTCCTCCTCGCAGGCTTCTTCTCTCACTGACTTTGGAGAGTGTGATGATTTTTCTGATAATTCCTTTGCTGCCAAAACTAACACCACAAGCCAGACCAAGCTTTTAAGCAAGCTTAGACAACTGATACAAGGTAAAGATAGTAGTCATCACCATTGTCATGTTTCATCACAAGAAAAATGTGGACATCAAGATAGCAATCCTCCACAGCAAAGTACTTCAACTGGAATTGAGGGTCTTAGGAGTGAGTCTGCAACTCCCATTGTCACATCTAGAACTTCCCTTGATTTCTCTAGGTTGATGAGTACTCAGGAAGAAGTAGATAGGAGAAATTCAGATAGCGTTTTCATGGGAAGCTCAAAGAAACTCAGTGCACATCAAAGAGGTTCCTTCTCAGATTCTTTAGGCTTGGAAAAAAATAATTTGGAGAAATATGCAGAAGCTTTAAAAGACTCTAGCTTGAGTGGTAGACATCAAAGACGAAGTAGATCAGCATCCTGTAGTTAG 1773 0.41 MVIIQEKGVKPVLLKFGLALALSFAGFLYSRFRIRRIKPSQSRKGGSFDHESEVNSGGGIGAALSTCNIISAANFLCSEETCTDRVITGNSPLVLSPDSTQNGDPLKVVDFGATVVRNSFNKDMEAPWLKVYADPDKDDYEQEVTQLRNMIRMLQDREQSLEVQLLEYCGLREQETVVMELQNRLKASTVEVKMFNLKVKTLQSENWRLKEQVSDHAKVLAELESAKAQVKLLNEKIRYEAEQNREQIVSLQQKVSRLQDQQCKDAACDQDIQIKLQKLKDLESEAEELRKSNLRLHIENSHLVRRLDSTQILANAVLEDPEVDAVKQESECLKQENVRLMKEIEQLHSDRCSDLEELVYMRWINACLRYELRNFEAPPGKMVAKDLSRSLSPTSERKAKQLILEYANTDGPGNTVDFDIDQWSSSQASSLTDFGECDDFSDNSFAAKTNTTSQTKLLSKLRQLIQGKDSSHHHCHVSSQEKCGHQDSNPPQQSTSTGIEGLRSESATPIVTSRTSLDFSRLMSTQEEVDRRNSDSVFMGSSKKLSAHQRGSFSDSLGLEKNNLEKYAEALKDSSLSGRHQRRSRSASCS* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1701 590 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 2 590 IPR040265 -
Pvu5g1701 590 Coils Coil 137 164 - -
Pvu5g1701 590 Coils Coil 216 261 - -
Pvu5g1701 590 MobiDBLite consensus disorder prediction 535 559 - -
Pvu5g1701 590 MobiDBLite consensus disorder prediction 469 507 - -
Pvu5g1701 590 Coils Coil 323 350 - -
Pvu5g1701 590 MobiDBLite consensus disorder prediction 524 559 - -
Pvu5g1701 590 MobiDBLite consensus disorder prediction 482 507 - -
Pvu5g1701 590 Coils Coil 272 299 - -
Pvu5g1701 590 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 2 590 - -
Pvu5g1701 590 Coils Coil 171 191 - -
Pvu5g1701 590 MobiDBLite consensus disorder prediction 571 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1701 Pvu-Chr5 39010980 39014500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1701 - - gmx:100796238 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1701 5 39010980 39014500 Pvu5g1701 5 39010980 39014500 ECH
Pvu5g1701 5 39010980 39014500 Pvu10g1494 10 41529615 41532975 PCT