Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1633 ATGGCCCTCTCTCCAATCTTCTTCTTTGCTGTAATCTTTCTCATTCATGGCAATGGTGTTCTTCCCATTGAAGCTACTCACCATGTTTACAGAAATCTTCAGACTCTTTCTTCTCACTCCTCTGATCATCAGCCTTATAGAACTGCTTATCATTTTCAACCTCCCCAGAATTGGATAAATGATCCTAATGCACCAATGAGGTACAAAGGACTTTACCATCTGTTCTACCAATACAATCCAAAAGGTGCTGTTTGGGGCAATATTGTGTGGGCCCACTCAGTATCAAAGGATCTAGTGAATTGGACTCCACTGGATCATGCCATATACCCTTCTCAGCAGTCTGATATCAACGGTTGTTGGTCAGGCTCAGCCACTATCCTTCCTGGGGGCAAACCAGCCATTTTATACACAGGAATTGACCCTAACAATCACCAAGTTCAAAACTTAGCCATACCCAAAAACTTCTCTGACCCATTACTCTTGGAATGGGTTAAGTCACCCAAAAATCCACTAATGGCCCCAACTGAAGCTAACCAGATCAATTCTAGCTCATTTAGGGACCCCACCACTGCTTGGCAAGGCAAAGATGGGTACTGGAGGGTGGTGATTGGAAGCAAAGTACACAGAAGGGGTGTGGCAATTTTGTACAAGAGCAAGAACTTTGTTAATTGGGTCCAAGCAGAACACCCCCTTCATTCAGCAGAAGGCACTGGAATGTGGGAGTGCCCTGATTTCTATCCAGTTCTGAACAAGAGCCCATTAACTACTGGCCTTGACACATCAGTGAATGGTGATAATGTTAGGCATGTGCTCAAGGTTAGCTTGGATGATACCAAACATGATCATTATCTGATTGGGACTTATGACTACACCAAGGATATCTTCACTCCGGATACAGGATTTGAGGATACTCAACACGTTTTAAGACACGACTATGGAAAATATTATGCCTCAAAAACCATTTTTGAAGATGGAAAGAACAGAAGGGTCTTATTCGGTTGGGTTAACGAATCCTCAAGTGTTGCTGATGATATCAAGAAAGGATGGTCTGGAATCCATACTATTCCAAGGACCATTTGGCTTCATAAATCGGGGAAACAGCTGGTGCAATGGCCGGTGGTTGAAATTGAAAGCTTGCGTGTGAACCCTGTCCACTGGCCCTCCAAAGTGGTCAATGGTGGTGAAATTCTTCAAGTCACTGGTGTTACTGCTACACAGGCTGATGTTGAAGTTTCATTTGAAGTGAATAAGATTGGAAAGGCCGAAGTATTGGACCATTGGGAAGATCCTCAAATTCTGTGTGGTCGAAAGGGTGCAGCTGTAAAAGGTGGTTTGGGACCCTTTGGTTTGTTAGTTTTTGCTTCTGGTGGCTTGCAAGAGTATACAGCAGTGTTCTTTAGAATATTTAGATACCAAAGTAAAAATTTGGTTCTCATGTGTAGCGACCAAAGCAGGTCTTCTTTGAATAAGGATAACGACAAGACAACCTATGGAACTTTTGTGGACGTGGACCCTCTTCTTGAGAAGCTCTCTCTAAGAACTTTGATTGATCACTCCATAGTAGAAAGTTTTGAAGGAGAAGGAAGGGCCTGCATCACAGCAAGAGTGTATCCCACAATAGCAATCAATGACAAGGCACAGTTATATGCTTTCAACAATGGAACTGCCTCTGTCAAGATCACAAAATTGAGTGCTTGGAGCATGAAGAAGGCAAAAATCAACTGA 1725 0.4301 MALSPIFFFAVIFLIHGNGVLPIEATHHVYRNLQTLSSHSSDHQPYRTAYHFQPPQNWINDPNAPMRYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIYPSQQSDINGCWSGSATILPGGKPAILYTGIDPNNHQVQNLAIPKNFSDPLLLEWVKSPKNPLMAPTEANQINSSSFRDPTTAWQGKDGYWRVVIGSKVHRRGVAILYKSKNFVNWVQAEHPLHSAEGTGMWECPDFYPVLNKSPLTTGLDTSVNGDNVRHVLKVSLDDTKHDHYLIGTYDYTKDIFTPDTGFEDTQHVLRHDYGKYYASKTIFEDGKNRRVLFGWVNESSSVADDIKKGWSGIHTIPRTIWLHKSGKQLVQWPVVEIESLRVNPVHWPSKVVNGGEILQVTGVTATQADVEVSFEVNKIGKAEVLDHWEDPQILCGRKGAAVKGGLGPFGLLVFASGGLQEYTAVFFRIFRYQSKNLVLMCSDQSRSSLNKDNDKTTYGTFVDVDPLLEKLSLRTLIDHSIVESFEGEGRACITARVYPTIAINDKAQLYAFNNGTASVKITKLSAWSMKKAKIN* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1633 574 CDD GH32_Fruct1-like 57 361 - -
Pvu5g1633 574 PANTHER CELL-WALL INVERTASE 2 574 - -
Pvu5g1633 574 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 2 574 - -
Pvu5g1633 574 SMART glyco_32 51 528 IPR001362 GO:0004553|GO:0005975
Pvu5g1633 574 SUPERFAMILY Concanavalin A-like lectins/glucanases 372 570 IPR013320 -
Pvu5g1633 574 ProSitePatterns Glycosyl hydrolases family 32 active site. 51 64 IPR018053 GO:0004553|GO:0005975
Pvu5g1633 574 Gene3D - 383 568 - -
Pvu5g1633 574 Pfam Glycosyl hydrolases family 32 C terminal 375 567 IPR013189 -
Pvu5g1633 574 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 372 IPR013148 -
Pvu5g1633 574 Gene3D Glycosyl hydrolase domain; family 43 55 382 IPR023296 -
Pvu5g1633 574 SUPERFAMILY Arabinanase/levansucrase/invertase 43 373 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1633 Pvu-Chr5 38396581 38399556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1633 66 574 Glycoside Hydrolase AT3G13790 62.863 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1633 K01193 - gmx:100776791 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1633 5 38396581 38399556 Pvu10g1432 10 41002639 41007370 PCT