Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu5g1620 | ATGGTGATGGAGTTCAGATCCAAATCATGCAGAGATGAAAGGCTCCAGATTGAAAGCAACTGTGGAGGCAAGGTGGCCCCAACAAGCATGCAAGATCTGAGGTGTCAGAGTGCTAATAATGGTTCTTCTGGTTATGTAAACCAGATAGGTAGCAGTGGTAAGGAGATGAAGGTGAAGAAGGGCAAAAGGGTAGCTGCAAAACCATCAAAAAGTTGGAGCTTTAGTGATCCTGAGTTGCAGAGGAAGAAGAGAGTTGCTGGCTATAAAATATATGCAGCAGAGGGCAAAATGAAAGGCTCTTTGAGAAAGAGTTTCAGGTGGATCAAGCATACATACACTCAAGCTCTCTATGGATGGTGGTGA | 363 | 0.4435 | MVMEFRSKSCRDERLQIESNCGGKVAPTSMQDLRCQSANNGSSGYVNQIGSSGKEMKVKKGKRVAAKPSKSWSFSDPELQRKKRVAGYKIYAAEGKMKGSLRKSFRWIKHTYTQALYGWW* | 121 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu5g1620 | 120 | Pfam | Domain of unknown function (DUF3511) | 74 | 118 | IPR021899 | - | |
| Pvu5g1620 | 120 | PANTHER | DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED | 3 | 119 | - | - | |
| Pvu5g1620 | 120 | PANTHER | OS06G0564000 PROTEIN | 3 | 119 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu5g1620 | Pvu-Chr5 | 38299586 | 38300425 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu5g1620 | - | - | gmx:100305940 | 204.912 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu5g1620 | 5 | 38299586 | 38300425 | Pvu10g1417 | 10 | 40887879 | 40889167 | PCT |