Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1594 ATGGTCAAAGCTAACACCACCAACACCCTAGTATCTACTATAGTTATTGCAGTCTTGATTTCCCCATATGTAGCATCACAAGCCCTCTCACCCAGTGATTCTGTTGCAGATAATGTGTCAGATACCATTAGACAATCGGATAATACTGTTAGAGTGGATCCTTTACATAATTTCGAAAAATACAGAGGAGGGTTTAACATCACCAACAAGCATTATTGGAGTTCGGTGATCTTCACTGGAGTATATGGATATGCAATTGGGGTGCTCTGCCTTTTGTGTGGAATTGTATATGGAAGCTTTTTGTTAATAACCTTGGTTTGCCAAAACAATGACAGAAGAAGGATTAAGAAGGTCTTTCCTTGTAATTACAAGAGTTGTGGTCTTTCAATTCCTTTGGCAATGTTACTCGCCACTTTTTCTATAGCTGCAACTGGGCTAGTTCTTGCTGGGAGTGCAAGATTCCATTCTGAAGCTAAGACTGCTGTTAATATTATAATCAAGACAGCGAATGAGGCATCAGAAACGATACAAAACACAACAGGAGCATTAAAAGACATGGAAAGTAACTTTATGGAAGCCAATGTCACTGCTGAGACTACAGTAAATCTTGACTCCACCACTGAGAAACTTGATGATGCCTCTGCAAACATTGCAAAACAAGCCATGAAGAATAGGCGCCTTATTGACAAGGGCTTAAAACTAGTGTTTGTTACTACCACAGTGATCATAAGCATGAACTTGGCTGCTGTAATAGCTCTATCAGTTTCTGGAGTACTGAGGATACGGCGAGCAGTATACCTGCTTGTCATATTATGCTGGTTGATGACAGTGATATGCTGGCTATTCTTTGGAGTCTATTTCTTCTTAGAAAAATTTTCTGGGGATGCATGCACAGCTCTTGACAACTTTCAAGAAAATCCCTATAACAACAGCCTAAGTTCAATCCTCCCTTGTGATGAATTGCTCTCTGCAAAATCAGTTCTATCTGATGTCAGTGCGGGGATCTACAACCTTGTTAATAAGGTGAATGCAAACATATCAGCCATGCAGGCAACATCAGATGTGAATCTTGTTCATGTCTGCAACCCCTTCTCAGGTCCACCCAAGTACTTATACCAGCCAGAGAACTGCCCTAAGAACACTATAAGAATAGGAGACATCCCAAAGGCACTGAAACCATTCACTTGTTTGAATGGCATTGATGGAAGCTGTGACAACTTGTACTACATAACAGGCAGCCAGTACACGAGAGTTGAGGCTTACACAAATTCAATTCAGGAAGTACTGAATGTGTATCCAAGTGTGGAACACTTGTTGGAATGCAAACTGGTAAAAGAAGCATTTTCTCAAGTCCTTGTCAACCACTGCAAGCCTTTGAAGAAATATGCTGAGATGGTGTGGCTAGGAATGCTGCTTCTTGCAGTGATCATGGTGTTGTTAATTGTGTTGTGGACTGTAAAAACTCGCCATGAGCATCGGTGCAATCTTTCAGATGGTTCTGTGGAGCCTCATTTTGCACCAACCGAAGCCTTGGAAAAAAGAACAGTTAAAGAGATCCAGATTTGA 1566 0.4106 MVKANTTNTLVSTIVIAVLISPYVASQALSPSDSVADNVSDTIRQSDNTVRVDPLHNFEKYRGGFNITNKHYWSSVIFTGVYGYAIGVLCLLCGIVYGSFLLITLVCQNNDRRRIKKVFPCNYKSCGLSIPLAMLLATFSIAATGLVLAGSARFHSEAKTAVNIIIKTANEASETIQNTTGALKDMESNFMEANVTAETTVNLDSTTEKLDDASANIAKQAMKNRRLIDKGLKLVFVTTTVIISMNLAAVIALSVSGVLRIRRAVYLLVILCWLMTVICWLFFGVYFFLEKFSGDACTALDNFQENPYNNSLSSILPCDELLSAKSVLSDVSAGIYNLVNKVNANISAMQATSDVNLVHVCNPFSGPPKYLYQPENCPKNTIRIGDIPKALKPFTCLNGIDGSCDNLYYITGSQYTRVEAYTNSIQEVLNVYPSVEHLLECKLVKEAFSQVLVNHCKPLKKYAEMVWLGMLLLAVIMVLLIVLWTVKTRHEHRCNLSDGSVEPHFAPTEALEKRTVKEIQI* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1594 521 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 13 517 IPR040283 -
Pvu5g1594 521 Coils Coil 169 189 - -
Pvu5g1594 521 PANTHER OS11G0264500 PROTEIN 13 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1594 Pvu-Chr5 38120933 38125927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1594 - - gmx:100805495 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1594 5 38120933 38125927 Pvu11g0541 11 4477829 4482306 PCT