Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1550 ATGCATAAGCCAGAAGGGCCACCAGAGTTTGCTCTCAAGGAGACCTCACCTAACATAGGGGCAGGTGCAGTCATGAGGGACAAGCTCTCCTGCACCTATGACCTGGTTGAACAAATGCAGTACCTTTATGTTCGAGTGGTGAAAGCCAAGGATTTACCAGGGAAGGATGTTACTGGTGGTGTGGATCCCTACGTTGAAGTGAAGCTTGGAAACTACAAGGGCCTTACCAAGCACTTTGAGAAAAAGTCCAATCCTCAGTGGAATCATGTTTTTGCCTTCTCCAAGGAAAGTATTCAAGCTTCTGTTCTGGAGGTGGTACTGAAAGACAAAGATGTTGTTGTGGATGAGTTTGTAGGGAGAGTGATGTTTGATCTGAATGAAATACCAAAACGTGTGCCACCAGATAGCCCTTTGGCTCCACAGTGGTACAGGCTGGAAGACAGGAGAGGTGAGAAAGCCAAGGGAGAGTTAATGTTGGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGATGCATGGCATTCTGATGCAGCAACTATTGGTCCTGAGGCTGTTGCAAACATAAGATCAAAGGTTTACCTTTCACCTAAGCTTTGGTATGTCAGGGTCAATGTTATTGAGGCTCAGGACTTGATACCAAGTGACAAAACCCGGTATCCTGAAGTTTTTGTGAAGGCCAATCTGGGAAATCAGTTTTTAAGAACTAGAGCATCTCAAAGTAAAACCATAAATCCCATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAGCCATTTGAGGAGCCCTTGGTTCTGACTGCAGAAGACAGGGTTGGACCAAACAAGGATGAAATCCTGGGAAGGTGTGTCCTTCCTTTACACAATGTGCAAAGGAGGTTGGACCATAAGCCTGTGAACACAAGGTGGTTTAATCTTGAAAAACATGTGGTTGCTGAAGGGGAAAAGAAGAAAGAGCCCAAGTTCTCAAGTAGGATACACTTGAGGGTTTGCTTGGAAGGTGGCTACCATGTGCTGGATGAATCAACTCACTACAGTAGTGATCTTAGGCCAACTGCAAAACAGCTATGGAAGGCCAGCATTGGAGTTCTGGAAGTGGGGATTATAAGTGCACAAGGGCTGATGCCCATGAAGACAAGAGATGTCAGAGGAACCACAGATGCCTATTGTGTAGCTAAATATGGGCAGAAGTGGATCCGTACTAGGACAATTGTGGATAGCCTTGCTCCAAGGTGGAACGAGCAATACATTTGGGAGGTTTTTGATCCATGTACTGTGATCACAGTAGGGGTTTATGATAATGGTCATTTACATGGAGGAGAGAAATCAGGTGGATCAAAGGATTCAAGAATAGGGAAGGTGAGAATTAGGCTCTCCACTCTTGAAGCTGATAGGGTGTACACACACTCTTATCCTCTTTTAGTACTGCATAATTCAGGTGTGAAGAAAATGGGAGAGGTGCAATTGGCTGTAAGGTTCACAAGCTTATCTTTGATAAACATGTTGTCTATGTACTCACAGCCATTGTTGCCAAAGATGCATTACATCCATCCACTATCTGTGATTCAACAAGACAGTCTTAGGCATCAAGCTATCCAGATTGTGTCAATGAGGTTGAGCCGGGCTGAGCCACCACTGAGGAAAGAGGTGGTAGAATACATGCTAGATGTGGATTCACACATGTGGAGTATGAGAAGGAGCAAAGCCAATTTCTTCAGAATAACCATAGTTCTTGGTGGGTTGATAGCCTTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAGAACCCCCTCACATCCATACTCATTCATATCCTTTTCATAATACTGGTTCTTTATCCAGAACTAATCCTTCCAACAACTTTCCTCTACCTTTCTCTGATTGGAATTTGGAACTTCAGATGGAGGCCAAGACATCCTCCTCATATGGACACAAGACTATCTCATGCTGATGCTGCTCACCCTGATGAACTAGATGAAGAGTTTGATACATTCCCTACTTCTCGATCATCAGATATGGTTAGAATGAGGTATGATCGCTTAAGAAGCATTGCTGGGAAGGTTCAAACTGTTGTAGGGGACTTGGCCACTCAAGGAGAAAGGTTCCACAATCTACTAAGCTGGAGAGACACAAGGGCCACCACTCTTTTTGTGACATTCTGTTTCATTGCTGCACTAGTTCTCTATGTTACTCCTTTCCAAGTTGTGTTTCTTCTCATTGGCTTCTATGTTCTAAGGCACCCCAGATTCCGCCACAAACATCCTTCAGCCCCATTCAACTACTTCAAGAGATTGCCTGCTAGAGTGGACACCATATTGTAA 2325 0.4434 MHKPEGPPEFALKETSPNIGAGAVMRDKLSCTYDLVEQMQYLYVRVVKAKDLPGKDVTGGVDPYVEVKLGNYKGLTKHFEKKSNPQWNHVFAFSKESIQASVLEVVLKDKDVVVDEFVGRVMFDLNEIPKRVPPDSPLAPQWYRLEDRRGEKAKGELMLAVWMGTQADEAFPDAWHSDAATIGPEAVANIRSKVYLSPKLWYVRVNVIEAQDLIPSDKTRYPEVFVKANLGNQFLRTRASQSKTINPMWNEDLMFVAAEPFEEPLVLTAEDRVGPNKDEILGRCVLPLHNVQRRLDHKPVNTRWFNLEKHVVAEGEKKKEPKFSSRIHLRVCLEGGYHVLDESTHYSSDLRPTAKQLWKASIGVLEVGIISAQGLMPMKTRDVRGTTDAYCVAKYGQKWIRTRTIVDSLAPRWNEQYIWEVFDPCTVITVGVYDNGHLHGGEKSGGSKDSRIGKVRIRLSTLEADRVYTHSYPLLVLHNSGVKKMGEVQLAVRFTSLSLINMLSMYSQPLLPKMHYIHPLSVIQQDSLRHQAIQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRITIVLGGLIAFGRWFDQICNWKNPLTSILIHILFIILVLYPELILPTTFLYLSLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSSDMVRMRYDRLRSIAGKVQTVVGDLATQGERFHNLLSWRDTRATTLFVTFCFIAALVLYVTPFQVVFLLIGFYVLRHPRFRHKHPSAPFNYFKRLPARVDTIL* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1550 774 Gene3D C2 domain 25 163 IPR035892 -
Pvu5g1550 774 Gene3D C2 domain 187 333 IPR035892 -
Pvu5g1550 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Pvu5g1550 774 CDD C2B_MCTP_PRT_plant 41 165 - -
Pvu5g1550 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Pvu5g1550 774 Pfam C2 domain 363 474 IPR000008 -
Pvu5g1550 774 Pfam C2 domain 41 134 IPR000008 -
Pvu5g1550 774 Pfam C2 domain 201 307 IPR000008 -
Pvu5g1550 774 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 6 774 - -
Pvu5g1550 774 CDD C2C_MCTP_PRT_plant 202 352 - -
Pvu5g1550 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Pvu5g1550 774 Gene3D C2 domain 361 498 IPR035892 -
Pvu5g1550 774 SMART C2_3c 202 300 IPR000008 -
Pvu5g1550 774 SMART C2_3c 364 471 IPR000008 -
Pvu5g1550 774 SMART C2_3c 41 137 IPR000008 -
Pvu5g1550 774 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Pvu5g1550 774 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 6 774 - -
Pvu5g1550 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 496 IPR035892 -
Pvu5g1550 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Pvu5g1550 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Pvu5g1550 774 CDD C2D_MCTP_PRT_plant 364 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1550 Pvu-Chr5 37767318 37770449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1550 1 774 Lipid Metabolism Gene Families AT3G57880 80.155 0.0 1323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1550 - - gmx:100809753 1487.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1550 5 37767318 37770449 Pvu5g1550 5 37767318 37770449 ECH
Pvu5g1550 5 37767318 37770449 Pvu11g0581 11 4855949 4858560 PCT