Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1542 ATGATCATGGATAGAACATCGCAGAGCAGCTCCGATTCGCCGACGCGAGATCCGAAAGTGCTTTCCATCGAGTGTCTGAGAGGAAGCTCGAAAGCCGACGAGTGGACCGGCGACATGCTCCAAAGCGGTGACATCGTGGAGGAGCTCCGAATCGGTTCGACGGCGAAATCGCAGATCCGGTACCAATCGCCGTTCAAGGGCGGGAGGAGCGGGGTGCAGAAGATCCTTCAGGAGGCGTTCAAGAAGAAGGAGACGTCGATTGTGGTTCGGGTGCGGCGAGGATCGGAGGAGTTGGTGGAGTTGCAGGCGTGCATCGTGCCGAACGAATTCGCGGCGAAGAAGGGTTTGGTTCTTCGCTCGATTGATGACCCAAATTACGTGGTCGGGTTCTTGGATCGGACCGAAGCAGAATGCTTCGAGCTTCAAGCTTCCAGGGGCACTAGGATGGTAAATGCATTAAACAAGACCAAGTTACAGGATGGATATGTTTCGTATTCATGGGAGAGGAGAATGCAAGAAATGCTATCAGTTCCCAATTCTAGCAACTTTCTTTCCATATTATTCCTTCCCAAAGCTTCAGATCGGGTAGCTTCTCGCTACAATGATCTGGAGGATACCCTAGCCAGGGTAAATGCATGGCTCAATGCAGGTCAAGCTTCGGGGGTCCCTATTGTCTTCATGAACATCCAAACTGAGTCCCTACTTACTAAGATATCTGGAGAGACAGCTTCTTCCACTGTGAATGCAGGATCATTATCTGACTTAGCTAACATAGCAAACGCAAGCCTTTACGGGTTTGAGGATTACCATGGAATAGACATTGGCGTTGTTCGAGCAGTTCGCCTATGGTATGCTCCTGTTGCAGGAGAGTTCTCTATTGAAATCAAACTAAAAGAGGAAGACTCAAAGCTTGGCTTTGCCATTAGTCGTACTGAAGAGGGATTTATTTTCATCTCATCGGTCATTAATCAAGAAAATGTACCAGCCACACGATCAGGTCTGAGCAATCTGTATAAACTGGCAACAGATACTTGTAGGATGTTGGTGGTTTCAAGAGTGTCAAATAAAAAAGTCCTTCCATGGATGGTTTCTTCAACAGGAGCTATTCGGTGTTATGACACTGTTTCACTCAGCCAGAAGCTGTCCTTGCACCGACACACCAGAGTTCCCATTCTCCTACACGTCTTCCTTTGGGACAGGGCTTTGGCAGCTTCAAGTGGAGGAAGCACGAGATTTAGGGCCTTGTCTTCTTCTGTGTTGCCATCACATGCATCTGAAGTTCAGCTACCACCCATTCCAAACGAAACTCATGTACTTCCATTGCCCCCTCCACCTTCTGAACCAAGTGATATTACAAGTGAAATTTCCCAGTCCAGGCTTCAGAGAGACACGGCTGGGGAATTATCTTTTAGATTCCATGATTTTGCTTTGTCTAGTAACTGGGTATGA 1449 0.4796 MIMDRTSQSSSDSPTRDPKVLSIECLRGSSKADEWTGDMLQSGDIVEELRIGSTAKSQIRYQSPFKGGRSGVQKILQEAFKKKETSIVVRVRRGSEELVELQACIVPNEFAAKKGLVLRSIDDPNYVVGFLDRTEAECFELQASRGTRMVNALNKTKLQDGYVSYSWERRMQEMLSVPNSSNFLSILFLPKASDRVASRYNDLEDTLARVNAWLNAGQASGVPIVFMNIQTESLLTKISGETASSTVNAGSLSDLANIANASLYGFEDYHGIDIGVVRAVRLWYAPVAGEFSIEIKLKEEDSKLGFAISRTEEGFIFISSVINQENVPATRSGLSNLYKLATDTCRMLVVSRVSNKKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHTRVPILLHVFLWDRALAASSGGSTRFRALSSSVLPSHASEVQLPPIPNETHVLPLPPPPSEPSDITSEISQSRLQRDTAGELSFRFHDFALSSNWV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1542 482 MobiDBLite consensus disorder prediction 426 458 - -
Pvu5g1542 482 PANTHER OS02G0717600 PROTEIN 1 482 - -
Pvu5g1542 482 MobiDBLite consensus disorder prediction 435 449 - -
Pvu5g1542 482 PANTHER - 1 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1542 Pvu-Chr5 37696667 37701561 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1542 - - var:108333257 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1542 5 37696667 37701561 Pvu5g1542 5 37696667 37701561 ECH
Pvu5g1542 5 37696667 37701561 Pvu11g0588 11 4908575 4912121 PCT