Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1421 ATGCAGCAGACCCCAAAGACAAGAAGTAGCTCCTCTGAAGTGCCTCAGAAAGTATCCCCTCGTGGTGGACGCCAACTCAGGCCTGCTACACTAGACACTGCATCTTCATTAAACCAAGCTCACAGGATTTCAAAGGATAATAGAAGTCCCAAAGTCACCGAACGCAGATCACCCAGAAGTCCAGCTCCAGAGAGGAAGCGTCCTAGCAGAATATCTGAATTAGAATCTCAGATTTTTCAACTCAAAGAGGATTTGAAGGTTGTGAGGAACCAGCTCAGTTTGTCTGACTCATCCAAGAAGCAAGCTCAGGAAGATGCTGAAGAGTCCAAGAAACAACTATTTTCCGTATCTGTGAAACTTGAAGATTCTCAACAGCAGTTTCTGAAGTTCTCTGCTTCTGAACAAGCTCGTGTTGTTGAGCTTCAGAAAACTATAGAAGAGCATGATAAGGCGTGGCAATCCGAACTCAAAGCTGCCCAACGGAAGCTCTCAGACAACACTGCTGCACTGACCTCTGCTATCGATGAAATTCAGCAGCTCAAGGTTCAACTTGAATTGGTAGCTAATTGTGAGAATGCACCCACCCAAATTGCAGAATCATCGGACGTGGAATTGCTAAACTTGAAGGATAACTTGGCAGAATCTCTTACACTTGTGGAGAACATGAAAAATCAACTCAGGGATTCTAAAGAGTCAGGTCAGGCACAAGCTTTGGTCAATGAGACTTTGCGACAACTTGAAGCTGCAAAAAGAACTGTTGAGTTTTTGAGATCTGATGCTGCAAAAGCTTTACATGGATACAACTCTGCTGCTTCGGAATTAGACCAATCTAGAACACGGGTGGACTCACTTGAGACACTAGTCAGTAAACTTGAGTTTGGCCTCATTCGTAACAAATGCAACCATTCTATAAATGTTGCAGATGATAGGATCATGGAGCTGAAAGCTGAGATATTACACAAGGGTGAGGATCCTAATCGCACTGAAGCAGAAATTTATTCTCTGAGGTCTGCCATAGAGACTGCCGAGACTAAGTACCAGGAAGAACATGAGTGTTCAGTGAAGCTCAGAAAAGCCTATGAGCTGATTGAGCACATAAAATCAGAATCAAGCCAGAGGGAATCCGAGCTAGAGGTAGAATTGAAAAGAAAGAACGCTGATATTGAACATTTGAAGGCTAACCTATTGGATAAGGAAACTGAGTTGCAGGGCATTGTGGAGGAGAATGAGAAGTTGAATTTGCAGCTTCGAAAGAGCATTTCATCCCAAAGAGAACTTGAACTTAAAAAGGAGCTTCGGAAACTAGATGAATGTGTGGCTGAGTTAAAGGGTGATCTAATGGACAAGGAAACAACATTGCAAAACATATCTGAAGAGAATGAAATGCTGAAGTTGGAGATCAGTAAGAGGTTTGCACACGGTGGTAAAGTGGGGGAGGAAGTTGCTGCAGAACTTGTGGCAGCTAAGGCTGCCGAACGTGAGGCTGTTATGAAACTTGCTATTGTGATGGAAGATGCAGAAAGGAGCAACCGAAAGACGGAGAGGGTAGCTGAGCAGCTGGAAGCATCTCAGGCAGCAAATTCAATTGTAGAATCTGAACTGAGAAGATTGAAGGTACAGTCTGATCAATGGAGGAAGGCTGCAGAGGCAGCTGCTGCTATGCTCTCAGCAGGGAACAATGGGAAGCTGACTGAGAGATCAATGTCTTTGGACAACAACTATAACTCTATAATGAATAAGTACTCACCTTTCTGTGAAGAACTTGATGATGATTTTCAGACCAAGAAAAATGGCAACATGCTGAAGAAGATTGGGATCTTGTGGAGGAAACCTCAAAAATAG 1842 0.4349 MQQTPKTRSSSSEVPQKVSPRGGRQLRPATLDTASSLNQAHRISKDNRSPKVTERRSPRSPAPERKRPSRISELESQIFQLKEDLKVVRNQLSLSDSSKKQAQEDAEESKKQLFSVSVKLEDSQQQFLKFSASEQARVVELQKTIEEHDKAWQSELKAAQRKLSDNTAALTSAIDEIQQLKVQLELVANCENAPTQIAESSDVELLNLKDNLAESLTLVENMKNQLRDSKESGQAQALVNETLRQLEAAKRTVEFLRSDAAKALHGYNSAASELDQSRTRVDSLETLVSKLEFGLIRNKCNHSINVADDRIMELKAEILHKGEDPNRTEAEIYSLRSAIETAETKYQEEHECSVKLRKAYELIEHIKSESSQRESELEVELKRKNADIEHLKANLLDKETELQGIVEENEKLNLQLRKSISSQRELELKKELRKLDECVAELKGDLMDKETTLQNISEENEMLKLEISKRFAHGGKVGEEVAAELVAAKAAEREAVMKLAIVMEDAERSNRKTERVAEQLEASQAANSIVESELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSMSLDNNYNSIMNKYSPFCEELDDDFQTKKNGNMLKKIGILWRKPQK* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1421 613 Coils Coil 503 540 - -
Pvu5g1421 613 Coils Coil 71 91 - -
Pvu5g1421 613 MobiDBLite consensus disorder prediction 1 72 - -
Pvu5g1421 613 MobiDBLite consensus disorder prediction 29 43 - -
Pvu5g1421 613 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 3 613 IPR029688 -
Pvu5g1421 613 MobiDBLite consensus disorder prediction 44 72 - -
Pvu5g1421 613 Coils Coil 239 259 - -
Pvu5g1421 613 Coils Coil 374 415 - -
Pvu5g1421 613 Coils Coil 205 225 - -
Pvu5g1421 613 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 3 613 - -
Pvu5g1421 613 Coils Coil 439 466 - -
Pvu5g1421 613 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1421 Pvu-Chr5 36594125 36600209 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1421 - - gmx:100798050 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1421 5 36594125 36600209 Pvu5g1421 5 36594125 36600209 ECH
Pvu5g1421 5 36594125 36600209 Pvu11g0739 11 6448275 6454476 PCT