Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1411 ATGGCCAGAGGTTCCTCTCAGTCTCAGTCCTCCACTTCAACGGCCGCGCGGCCAGGAATCGCGGCTCCCCGCGGCTCTGCTGCTGCCACCGCCGGCATGCGCCGTCGCCGTCTTGCCGGTGGAAACAGCTCCACCAGCGCCAGTGTCGGCGGCGGCGGCGGAGGCGGCAACATGCTGAGGTTCTACACGGACGATGCTCCGGGGCTGAAGATTTCGCCGACGGTGGTGCTGGTGATGAGCCTCTGCTTCATCGGCTTCGTCACCGCTCTCCATGTCTTCGGCAAACTCTACCGCTCCAAATCCGGCGGCGCCGCTTGA 318 0.6604 MARGSSQSQSSTSTAARPGIAAPRGSAAATAGMRRRRLAGGNSSTSASVGGGGGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKSGGAA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1411 105 PIRSF Sec61_beta 5 102 IPR030671 GO:0005784|GO:0006886
Pvu5g1411 105 Pfam Sec61beta family 56 94 IPR016482 -
Pvu5g1411 105 MobiDBLite consensus disorder prediction 1 17 - -
Pvu5g1411 105 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 104 - -
Pvu5g1411 105 MobiDBLite consensus disorder prediction 1 55 - -
Pvu5g1411 105 PANTHER SEC61 SUBUNIT BETA 1 104 IPR030671 GO:0005784|GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1411 Pvu-Chr5 36455365 36456199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1411 K09481 - gmx:100814692 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1411 5 36455365 36456199 Pvu11g0759 11 6722114 6722878 PCT