Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1380 ATGGTAAATGGTATTCGTTCTAGTCACAGTGCTAAGGACGAAGACAATAAATATGGGAGGGTCACACAAAATGGTGACAAGGGAAAAAAAAAATCACATTCTAATGTATCAGGTGCAACTGGTTTCAGACGGTCTCCTAGACAGACATCATCAAGGAGGATAATTTCTAGCTCTTCAAGTACTTGTAAGTCCAGGCAATTTGAAAAGGGACCAACACCTGTTGATAACAAGAAATCTGAATTGGTTGAAATAAAGAACATGCCAAGTCCTTTGAGAAGATCTGGAAGGGCTAGGACTTACTCTTCTACGTCTACCAGACATTCTGACAGCTCAGGTTCATTAAATTCAAACCCTAAGCCAAAAAAAGAGAAGAGTATGAGACAGTTGACATTTCAAGCTGAAGAAGTAAAGGACAATAAGGAACAAGATCTGGGAACACCCCAGGGTAAAGTAAAGCGAATTACTGCTCCCATGTACAGGTCTTTCTTTGATTTACCAAAGGAAGTTGCAGAGCCTAACAGGATCGACAAGTCAAATCAAGATGGTAACAATATTCGAGGCAAGATTGATGGGTGCTTTGAAGGTAGTCATTCTGATTGTGGAAAACTCTCCAAGAATGGTGCACTACCATCTAAAGATGGAAAGTTAAAAGAGATGAGAGTTAGCTCTAGGTTGAGTGACTCTGTGAAAGATCTGTTTGAAAATACCGAAACTTTGGATTCATTGGCACCGTCTAATGCTGCAACTTATGAGGCTGGTTTGGCACCTGAAAGGACATTGGATGAAGATTTAATCAGGAAAACTGTTGGAGACAATAGAGTTGAAAAATTAATGCCTTCTAAGAGAAAGGAAGTCACTGTGGGTATGGATTTAGCTGTTTCTGCTACCTTGGCCAAGGGTGACAATTGCAACTTGACTTCTGATTCTGGTGGCCCGTCCAGGATCAGTGGCAAAATTATGGGGGCTGACGGTCCATCTAATGCCACAATTTTTGAGACTGGTTTGGTATCTGAAAGGGTTCAGCCTGATCACTGCAGAGAAGAAACATTACCATCAAGCAACTCCAAGAATGGTGTGCTACTATCTGAAGATGAAAAATCAAAAGAGATGAGAGTTGACCATGAGTTGAGTGGTCCTTTGAAAGACCTAGTAGAAAATAGTGTTTCTCTAGGTTCATTGGCACCATCTAATGCTGCAACTTTTGAGAATGGTTTGGCGCCTGAAAGCATTCAGCAGCCCGATTGTGTATTGAGGACTGAAGGTTCACATTCCAAGCGGATAAGGTTGGATTATAATCCTACAGTCAGTGAGTCTGGTAGCCCATCTACAACCGAGCTTGAAGATGGGGATTCTATTGCTGCAAGCATGCTGCAGAAGGACTCTCAAATTGATAATGAAAAAGAAGCTGGTTTAATAACTAATTCCATTAATAGTGTCACTCATCTGAAGGAGAGGTTGCCAAGTCATAATCCATACAGATGCAAGTCTGATTCCTTTAGGTTTGTTGAGTATTGGGTTCCTGTACAAATATCTAATCTGCAGCTTGAACAGTATTGTTCTATTTTACTTTCAAATGCTTCAATTCTGCGCTCCTCATCTAAGGTTGACAGCGTTGAGGCTGTTCGTGATGTTCTTATTTCAACTCGGAAGTGTTGTAGTCATCCCTATCTTGTTGGCCCAGATTTGCAACCTTCTCTTAACAAGGGTCTCGAACCAATTGAATATCTTGATTTTGATTTAAAAGCAAGTGGCAAGTTGCAACTTCTTGATTCAATGCTTGAGGAGTTGAAAAAAAATGATTTTAGGGTGCTCATTCTTTTTCAGTCTATTGGAGGTTCTGGAAGAGTTATAGGAAATTATTTGGAAGACCTACTTCGACCAAGATTTGGTCCAGATTCGTATGAACGGATTGATAAAAATATTCTGCCTTCTAAGAGGCAAGCTGCCATGAAGAAATTTAACGACAAGAACAATAGACGATTTGTGTTTTTGTTAGACACATGTGCTTGCCTTCCAAGCATCAAATTGTCATCTATTGATTCTATTATTATATTTGATAGTGATTGGAACCCAATGAATGATATAAGATCCCTTCAGAAAATAACACTTGATTCACAGTTTGAATTAATAAAAATATTCCGGTTATATTCAACTTTCACTGTTGAAGAAAAAGCCTTAATCCTTACTAAGCAATGTAAGTCAATTGACTTCAATTTACAAAACATAAACTGGAGTACCAGTCATATGCTGTTGATGTGGGGTGCTTCTTGTCTATTTGATGAACTAAAAGCTTTTCATGATGGTGAAACTTCTGCGTCAAATGTGAAATCTTTGTTTGGGCGACCATTTCTGAAAGAAACAATGCATGAATTCTCATCCCTACTATCTCAGGATGGAGAACATGTTGATTCAAGCAACTGTTCAATCTTTTTGAAAGTGCAGCAAAATGGGGCAACATACCAAGGAAATTTTTCTTTGCTTGGTGAACTAAAACTTGGGTTACTGGATGAAGAACCATCCCAATTTTTTTGGACAAAACTTTTGGACGGAAAGCAGTTTCAGTGGAAGTACTTAAATAATTCATCTCAGCGGAGCAGGAAGAAAGTTCATCATTTTGATCTTGTAAGTGAAGTAGCAGCAAAGAAGCGCAGGAAAGTTAATAATATTGTTGATCAGCCTTCTTCAAAATTTGGAGATGAAAAGTTACTCGCAGGTAACAGGGGAGGAACACCTGGAGATTTAGTGGATAGATCTCAAGGATACAATGTTGAATCTGAGCAAAAAAGCAGACTGCATGATGAGCAGAGTAGCTTACATCTCTTGCTGAAGCCAGAGATCACAAAGCTTTGTGATTTTCTTCTTCTTCCGGATAAAGTGAGGACCACAATCGGTGAATTTGTTGAATATGTTATGAATAACCACGATGTCAATAGAGAACCGTTTTCAATATTACAGGCTTTTCAACTGTCTCTGTGTTGGACTGCAGCTTCTTTGCTAAAGCACAAACTCGATCCCATTGCTTCTGTTATAAAAGATTTGAACTTTGAGTGTAAGAAAGAAGAGGTGGACTACATTTATTCTATGTTGCGTTGTTTGAAGAAATTATTTTTATATCGTACAGGAAGTTATAATGAATCGGAATCTCCAAAAGCATCTGAACTATCAAATGGGGTACATACTGGAGTTGAACGAGAGGTTGAATTGTTCAAAAAAGATATGTCTAAAAGTATTAAAGAAATTCAGAAGAAGTGCAAAAAGAAGTTGAAGAAGCTATGCCTTTTGCAAGAGGAAGAGAAGCAAAGGTTGAAGGCAGATATTGAGGAAGAAGAGGCTAAATTCGAGGAAAGGTACAAAATACAGTCAGCTGTTATTCGATCCTGCTCTCCCAATGATGTTATAAGAATGGAACAGCTTAGGGTTTTGAATATTGAATACGAAAAAGGAATTGTAGAACTGAAATGTCAACATGAAACACAACTCAAGGATCTTGAGGCCAAGCAATCAGCTGACAAACAGAAGTTTCAAGATAAAGAGGCCGCTTGGGTAGAAGATGTGGAATCTTGGGCACAAAATGAACTTCTAAAAATAGTTGCTTCAAAGGAACTTGGGACTGGGGTTGAGTCCTTCCAGACTTATGGTCAAGTACAACCTGACAATGGTCTAAAGAATCATTTTTGTGAAGGAAAGGGTTGGAATAAGGTTAAAGTCATCACAGAGACTGTCATCGAGAATTCACCTTTATCTGATAAAAGAATTGCTAACGAGGAACTTTCGGGACTGCATGGGATTATCAATATTACAGATTCTCCAGAAAATCATGCTGCTGTGAATTCTCCTTCATCCATGGAACAAGAATCTGATGGACGTGCTGTAAATGAATTTTCTTATAGAGAATTAGGACTGAGGAATGGTCCTGATACACATTCAAGTCCATGGCACCAAAACTCTGGAGACCCATCTAGCATACCTAATGGACAAATTCCAGTTGAAGAGAAAGAAACTAGAAATGAACTGGACACTGTTTGTATATTAGTAAGAGATGTATCCCCGGGAACAAGAGGGATGGTCAATTTTACCGAGTGTCCACAGGATGCATCTCCTTTGAGTCCCCCATCATCTAGGACTCAAATGTCTGATAAAGGTCGACTAGAGGTCCCATGTTTAGATAGGGTTTTATCACCAAGGACTTGTCAAGCTGTTTGTTCAAGTGATGAAGGTCCAAATAATATGTCCATTTCAAGTCCACTTTTGGAGCAACGAACTACTGATGGAGTCCCTTCGAGTATTTCAGCAGCGGCTGATTGTCTTGATGATATAGAGCATTTAACAAATGCTGCAGAAGAGCGGGAAGGAGCACCTAAAACCATGGCAGAATTGTCCCAAGAGTCTCCAGTATCCAGAACAGTTAATGTCATGGATCATCCAGAACAAGTGGAGCAATTATCTATAGACTCCACTCCTGACCATGAAGCGTCTGAGGAATTGCAGCGTTCTTCTGAACAACCTGAACTGGTATCTAGTACAGTTGATGTTGTAGCAGCCGATCAATCCAATCAGGCTTCACTGATTGTGAATCCTGTAAAACAGGTGCAACAATTACTATCTGCAGAGCTCCCTTCCCACCTGAATTCACCTAATTTTTGTTTGTCAACTGAAGTTGAACATCAGCCAACTGTGGTTCCAAATCAAGACGTGCAATCTGACTCAAACTTGGAATATTCACATGGAGTTGTGGTGCACCCTTCCTCAAATTCAGACCCTAATACAGTTACACCTAGTGAAGTAAGAATGCAATCTGCAAACACAATAAATTCGTCATTTCCTCTGGAGATCAATTATCAACATATGGAAGCTGAACCACATTCAGCTTTCAGAAAGCTGCATTTGAGCTATTATGATCCACTCAAGATTGAATTGGATAGAATACGAAAAGTAGAAGATCAAACAATGAAAATCTATGAAGAAAAGAATATGCAGTTGAAATCTGAGTTTGAAAAGGAATTAGAGGAACTCCGCAGGAAGTACGATATTAAAATTCAAGGGATTGAAACTGAATTCAAACAAAGAAAGACGACCCTCGATACAGGTCTTAATGTAGTTCGTATGAATAGGTTTTTGGCAGATGCTTTTAGGTCTAAATGCTCAAATCTTAAACCATCGTGTACATCAGGGACGCTGCAAGATTCGAGTTTTGCGCAGCAGCAGTTGCTTCCGCCCTCAAGACAACAAAATGCTAATTGGCCATCCCTTGTTGCTGGTTCTTCTTGTGGTCCTTCTGCGACCAGTCGGCAGACTCCATCCACAAAGGGTAGCTCTCAGCTTACGATACATCCTATACGGAGTGGTTACAATACATCAGGATTTCCCCCCAATGCTTCTTCAAGATCACCAGTTATCAACACCATCTCTTTGCCAGTAGGAAATCTTCAACATGGTGGTGAGATTCGCGCCCCTGCACCGCATCTCCAGCCTTATAGACCATGA 5484 0.3972 MVNGIRSSHSAKDEDNKYGRVTQNGDKGKKKSHSNVSGATGFRRSPRQTSSRRIISSSSSTCKSRQFEKGPTPVDNKKSELVEIKNMPSPLRRSGRARTYSSTSTRHSDSSGSLNSNPKPKKEKSMRQLTFQAEEVKDNKEQDLGTPQGKVKRITAPMYRSFFDLPKEVAEPNRIDKSNQDGNNIRGKIDGCFEGSHSDCGKLSKNGALPSKDGKLKEMRVSSRLSDSVKDLFENTETLDSLAPSNAATYEAGLAPERTLDEDLIRKTVGDNRVEKLMPSKRKEVTVGMDLAVSATLAKGDNCNLTSDSGGPSRISGKIMGADGPSNATIFETGLVSERVQPDHCREETLPSSNSKNGVLLSEDEKSKEMRVDHELSGPLKDLVENSVSLGSLAPSNAATFENGLAPESIQQPDCVLRTEGSHSKRIRLDYNPTVSESGSPSTTELEDGDSIAASMLQKDSQIDNEKEAGLITNSINSVTHLKERLPSHNPYRCKSDSFRFVEYWVPVQISNLQLEQYCSILLSNASILRSSSKVDSVEAVRDVLISTRKCCSHPYLVGPDLQPSLNKGLEPIEYLDFDLKASGKLQLLDSMLEELKKNDFRVLILFQSIGGSGRVIGNYLEDLLRPRFGPDSYERIDKNILPSKRQAAMKKFNDKNNRRFVFLLDTCACLPSIKLSSIDSIIIFDSDWNPMNDIRSLQKITLDSQFELIKIFRLYSTFTVEEKALILTKQCKSIDFNLQNINWSTSHMLLMWGASCLFDELKAFHDGETSASNVKSLFGRPFLKETMHEFSSLLSQDGEHVDSSNCSIFLKVQQNGATYQGNFSLLGELKLGLLDEEPSQFFWTKLLDGKQFQWKYLNNSSQRSRKKVHHFDLVSEVAAKKRRKVNNIVDQPSSKFGDEKLLAGNRGGTPGDLVDRSQGYNVESEQKSRLHDEQSSLHLLLKPEITKLCDFLLLPDKVRTTIGEFVEYVMNNHDVNREPFSILQAFQLSLCWTAASLLKHKLDPIASVIKDLNFECKKEEVDYIYSMLRCLKKLFLYRTGSYNESESPKASELSNGVHTGVEREVELFKKDMSKSIKEIQKKCKKKLKKLCLLQEEEKQRLKADIEEEEAKFEERYKIQSAVIRSCSPNDVIRMEQLRVLNIEYEKGIVELKCQHETQLKDLEAKQSADKQKFQDKEAAWVEDVESWAQNELLKIVASKELGTGVESFQTYGQVQPDNGLKNHFCEGKGWNKVKVITETVIENSPLSDKRIANEELSGLHGIINITDSPENHAAVNSPSSMEQESDGRAVNEFSYRELGLRNGPDTHSSPWHQNSGDPSSIPNGQIPVEEKETRNELDTVCILVRDVSPGTRGMVNFTECPQDASPLSPPSSRTQMSDKGRLEVPCLDRVLSPRTCQAVCSSDEGPNNMSISSPLLEQRTTDGVPSSISAAADCLDDIEHLTNAAEEREGAPKTMAELSQESPVSRTVNVMDHPEQVEQLSIDSTPDHEASEELQRSSEQPELVSSTVDVVAADQSNQASLIVNPVKQVQQLLSAELPSHLNSPNFCLSTEVEHQPTVVPNQDVQSDSNLEYSHGVVVHPSSNSDPNTVTPSEVRMQSANTINSSFPLEINYQHMEAEPHSAFRKLHLSYYDPLKIELDRIRKVEDQTMKIYEEKNMQLKSEFEKELEELRRKYDIKIQGIETEFKQRKTTLDTGLNVVRMNRFLADAFRSKCSNLKPSCTSGTLQDSSFAQQQLLPPSRQQNANWPSLVAGSSCGPSATSRQTPSTKGSSQLTIHPIRSGYNTSGFPPNASSRSPVINTISLPVGNLQHGGEIRAPAPHLQPYRP* 1828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1380 1827 Coils Coil 1650 1685 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1359 1380 - -
Pvu5g1380 1827 Coils Coil 1085 1116 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1485 1504 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1447 1467 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 346 374 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1270 1289 - -
Pvu5g1380 1827 Gene3D - 475 500 IPR038718 -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 429 448 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 34 67 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 95 119 - -
Pvu5g1380 1827 Gene3D - 1631 1713 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1307 1323 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1362 1379 - -
Pvu5g1380 1827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 728 IPR027417 -
Pvu5g1380 1827 CDD SF2_C_SNF 583 695 - -
Pvu5g1380 1827 PANTHER HELICASE PROTEIN MOM1 10 1827 - -
Pvu5g1380 1827 PANTHER HELICASE PROTEIN MOM1 10 1827 IPR039322 GO:0031507
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1 127 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1737 1796 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 427 448 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1300 1327 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 8 33 - -
Pvu5g1380 1827 MobiDBLite consensus disorder prediction 1270 1288 - -
Pvu5g1380 1827 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 588 750 IPR001650 -
Pvu5g1380 1827 Gene3D - 501 731 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1380 Pvu-Chr5 36029008 36046837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1380 - K11642 pvu:PHAVU_005G133500g 3516.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1380 5 36029008 36046837 Pvu5g1380 5 36029008 36046837 ECH
Pvu5g1380 5 36029008 36046837 Pvu11g0840 11 7693596 7703416 PCT