Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1379 ATGGCTATCCAAAGTTTATTCATTCTCATTGTTTTACTCTTCCGCCCAGCAACGTCTGAGGAGTTTAACTATGATCCTTCAAGCCCAAATGGACCCCCAAACTGGGGAAATACATGGCCATTGTGTAGAGATGGAAGCACACAATCTCCTATTGACCTCAGAATTTCCAGGGCGAATGTGACCTACACTTCTGGGATTCAAAGGAACTATCAACCTGCAAACGCCACTCTTCTCACTTCAGGGCATGACGTTATGGTGAACTGGACTGAGAATGCAGGGCATATTATAATTAACGGAACTCAATACCATCTACTGCAAGGTCATTGGCACTCTCCCTCTGAACACACAATCAGTGGCATAAGGTATGATCTAGAGTTACACTTGGTGCATAGAAGTTCAGATGCAAGACTTGCAGTGACTGGGATTTTATATAAGTTTGGGATTCGAGGGGATGAGTTCATATCAACGATAGAATATGATTTAAAGTTGATGGCTGAAAATCAGACGAGAGTAACACAACTAGGTATTGTTGATCCAGAGGATGTAGCAGGGATCACAGGAAACAAGTATTTTAGATATAATGGTTCTCTTACAGTTCCTCCTTGCAGTGAAAATGTTCTTTGGACTGTTTTCATTAAAGAGGATAAAAGAGTCTCAAGGACGCAAAACAGGTTGATTCGAGCAGCAGTTGATGGAGCTGGTGATGAAACATTTATGAGTGCTAGACCAGTGCAGCCAAGAAACGGTCGTCCAGTGCAACTCTACTTACCTAGACATCAACATAGAAATTGA 792 0.4205 MAIQSLFILIVLLFRPATSEEFNYDPSSPNGPPNWGNTWPLCRDGSTQSPIDLRISRANVTYTSGIQRNYQPANATLLTSGHDVMVNWTENAGHIIINGTQYHLLQGHWHSPSEHTISGIRYDLELHLVHRSSDARLAVTGILYKFGIRGDEFISTIEYDLKLMAENQTRVTQLGIVDPEDVAGITGNKYFRYNGSLTVPPCSENVLWTVFIKEDKRVSRTQNRLIRAAVDGAGDETFMSARPVQPRNGRPVQLYLPRHQHRN* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1379 263 SUPERFAMILY Carbonic anhydrase 21 252 IPR036398 -
Pvu5g1379 263 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 17 258 - -
Pvu5g1379 263 SMART Carb_anhydrase_2a 24 256 IPR001148 -
Pvu5g1379 263 PANTHER CARBONIC ANHYDRASE 17 258 IPR023561 GO:0004089|GO:0008270
Pvu5g1379 263 CDD alpha_CA_prokaryotic_like 31 254 IPR041891 -
Pvu5g1379 263 Pfam Eukaryotic-type carbonic anhydrase 30 253 IPR001148 -
Pvu5g1379 263 ProSiteProfiles Alpha-carbonic anhydrases profile. 20 256 IPR001148 -
Pvu5g1379 263 ProSitePatterns Alpha-carbonic anhydrases signature. 113 129 IPR018338 GO:0004089|GO:0008270
Pvu5g1379 263 Gene3D Alpha carbonic anhydrase 18 260 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1379 Pvu-Chr5 36016840 36020778 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1379 K01674 - gmx:102660002 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1379 5 36016840 36020778 Pvu11g0842 11 7718445 7720636 PCT