Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1375 ATGGAGAAGCTTGCTACCATGGTTTTGATTTGCTGCTCACTGTTATTCCTGTCTTTATCAGTGATGTCTCGAGAAGTTGATGATGAGAGTGAGTTTAGTTACGAGGAAGAGAGCGAGAATGGACCGTCTCATTGGGGAGACATACACCCTGAATGGAGGTTGTGCAACAATGGATCCATGCAGTCACCAATTGATCTATTGAATGAGAGGGTTGAAATAGTATCCCAGCTAGGGAGGCTTCAGATGAACTACCAACCTTCTAATGCCAGTATTAGGAACAGGGGCCACGATATCATGCTAGAATGGGTTGCTGGTGCAGGTCATCTTCAAATTAATGAAACTAAGTACGTGCTCAACCAATGTCACTGGCATTCCCCCTCTGAACACACCATAGATGGCAAAAGGTTTGATCTAGAGTTACACATAGTGCACGAAACTCCATCTGGACAAACAACTGTGATAGGAATACTGTACAAGATTGGAAGAACACCAGATTCTTTCTTGTCATCGTTAACCAGTCATATAAAGGTCATTTCTAATAGCACGGAAGCAGAAAGAATGGTGGGTGTAGTTGACCCTAGGCAAATCAAAATTTTCTACAAGCAGTATTACAGGTATATGGGCTCGCTGACTATTCCTCCTTGCACTGAGAATGTTTCTTGGACCATCGTTAGAGAGATACGATCCGTTTCAAAGGAACAGGTTAGATTGCTCCGAGCTGCTGTTGATGATGAATCAGAAACCAACGCAAGGCCACTGCAACTAATAAACAACCGCTTGCTGCAACTTTACGCGCAAAAATATATTAAACATTGA 816 0.4277 MEKLATMVLICCSLLFLSLSVMSREVDDESEFSYEEESENGPSHWGDIHPEWRLCNNGSMQSPIDLLNERVEIVSQLGRLQMNYQPSNASIRNRGHDIMLEWVAGAGHLQINETKYVLNQCHWHSPSEHTIDGKRFDLELHIVHETPSGQTTVIGILYKIGRTPDSFLSSLTSHIKVISNSTEAERMVGVVDPRQIKIFYKQYYRYMGSLTIPPCTENVSWTIVREIRSVSKEQVRLLRAAVDDESETNARPLQLINNRLLQLYAQKYIKH* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1375 271 Pfam Eukaryotic-type carbonic anhydrase 40 261 IPR001148 -
Pvu5g1375 271 SUPERFAMILY Carbonic anhydrase 31 260 IPR036398 -
Pvu5g1375 271 CDD alpha_CA_prokaryotic_like 41 260 IPR041891 -
Pvu5g1375 271 ProSiteProfiles Alpha-carbonic anhydrases profile. 30 265 IPR001148 -
Pvu5g1375 271 ProSitePatterns Alpha-carbonic anhydrases signature. 127 143 IPR018338 GO:0004089|GO:0008270
Pvu5g1375 271 PANTHER CARBONIC ANHYDRASE 11 265 IPR023561 GO:0004089|GO:0008270
Pvu5g1375 271 SMART Carb_anhydrase_2a 34 265 IPR001148 -
Pvu5g1375 271 Gene3D Alpha carbonic anhydrase 28 270 IPR036398 -
Pvu5g1375 271 PANTHER ALPHA CARBONIC ANHYDRASE-RELATED 11 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1375 Pvu-Chr5 35925122 35927699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1375 K01674 - gmx:100810249 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1375 5 35925122 35927699 Pvu5g1375 5 35925122 35927699 ECH
Pvu11g0842 11 7718445 7720636 Pvu5g1375 5 35925122 35927699 PCT