Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1328 ATGGGGAATGCAAGTTATTTCATGACTTCCTTTCTTCTGGCTGTAGTGTTCAATGTGGCTAAAGGGCAGCCTCTGGTTCCTGCATTGTTCATATTTGGGGACTCTGTGTTTGATGTGGGCAATAATAACCAGTTATCCACCATTGTAAAAGCAAACTTCCCTCCTTATGGAAGAGACTTCAATAATCACACTCCAACAGGGAGGTTTTGCAATGGGAAGCTTGCATCAGACTACACAGCTGAAAACCTTGGATTTACCTCTTACCCGCCAGCTTACCTCAACTTAAAGGTCAAAGGAAAAAACCTCTTGAACGGTGCCAACTTTGCCTCAGCTGCTTCTGGCTACTACGATCCCACAGCTAAGCTTTATCATGCAATTCCATTGAGCCAACAGCTGGAACACTACAAAGAGAGCCAGAATATATTGATGGGAATAGCAGGGCAGTCAAATGCTTCATCAATTATATCTGGTGCTATATATCTTATCAGCGCTGGAAACAGTGATTTTATTCAGAACTATTATATAAATCCACTGCTTTACAAAGTTTACACTGCTGACCAATTCTCAGATATTCTAATGCAACAGTACGCCACTTTCATTCAGAACTTGTATGCACTTGGAGCAAGGAAGATTGGCGTCACAACATTACCTCCTATGGGTTGTCTGCCAGCAGCTGTCACTCTCTTTGGCTTTGATAGCAACGAATGTGTGGTTAGACTAAACAGTGATGCTGTTAACTTCAATAAGAAGCTAAACACTACGTCGCAAAGCTTGCAAAAATCGCTTTCTGGTCTGAAATTGGTCATCCTTGATATCTACCAACCTCTCTATGACCTTGTCACTAAGCCTTCTGATAATGGCTTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACAGGCTTGCTAGAGACATCTATACTGTGCAACCAGAAATCCATAGGAACGTGTGCCAATGCATCTGAGTATGTATTCTGGGATGGTTTTCATCCTTCGGAGGCTGCAAACAAGCTTTTGTCCGATGACTTACTGGCTGCTGGCATCTCTCTTATATCCTAA 1053 0.4245 MGNASYFMTSFLLAVVFNVAKGQPLVPALFIFGDSVFDVGNNNQLSTIVKANFPPYGRDFNNHTPTGRFCNGKLASDYTAENLGFTSYPPAYLNLKVKGKNLLNGANFASAASGYYDPTAKLYHAIPLSQQLEHYKESQNILMGIAGQSNASSIISGAIYLISAGNSDFIQNYYINPLLYKVYTADQFSDILMQQYATFIQNLYALGARKIGVTTLPPMGCLPAAVTLFGFDSNECVVRLNSDAVNFNKKLNTTSQSLQKSLSGLKLVILDIYQPLYDLVTKPSDNGFFEARKACCGTGLLETSILCNQKSIGTCANASEYVFWDGFHPSEAANKLLSDDLLAAGISLIS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1328 350 Gene3D SGNH hydrolase 17 346 IPR036514 -
Pvu5g1328 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Pvu5g1328 350 Pfam GDSL-like Lipase/Acylhydrolase 29 340 IPR001087 GO:0016788
Pvu5g1328 350 PANTHER GDSL ESTERASE/LIPASE EXL3 8 349 - -
Pvu5g1328 350 SUPERFAMILY SGNH hydrolase 29 341 - -
Pvu5g1328 350 PANTHER GDSL-MOTIF LIPASE 8 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1328 Pvu-Chr5 35319079 35320883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1328 19 341 Acyl Lipid Metabolism Gene Families AT4G10950 33.028 6.95e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1328 - - gmx:100804640 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1328 5 35319079 35320883 Pvu11g0911 11 8646620 8648985 PCT